RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 SSH3Q8TE77 659 aa24.4■■□□□ 1.5
ACTN4-208ENST00000497637 ZBTB47Q9UFB7 747 aaPredicted RBP24.4■■□□□ 1.5
ACTN4-208ENST00000497637 CNOT7Q9UIV1 285 aaKnown RBP24.4■■□□□ 1.5
ACTN4-208ENST00000497637 POLA2Q14181 598 aa24.39■■□□□ 1.49
ACTN4-208ENST00000497637 HABP4Q5JVS0 413 aaKnown RBP24.39■■□□□ 1.49
ACTN4-208ENST00000497637 KRT26Q7Z3Y9 468 aa24.39■■□□□ 1.49
ACTN4-208ENST00000497637 TRPM4Q8TD43 1214 aa24.39■■□□□ 1.49
ACTN4-208ENST00000497637 C9orf78Q9NZ63 289 aaPredicted RBP24.39■■□□□ 1.49
ACTN4-208ENST00000497637 PNMA6EA0A0J9YXQ4 647 aa24.38■■□□□ 1.49
ACTN4-208ENST00000497637 IGKV5-2P06315 115 aa24.38■■□□□ 1.49
ACTN4-208ENST00000497637 CSRNP1Q96S65 589 aa24.38■■□□□ 1.49
ACTN4-208ENST00000497637 GRM8O00222 908 aa24.37■■□□□ 1.49
ACTN4-208ENST00000497637 MTX1Q13505 466 aa24.37■■□□□ 1.49
ACTN4-208ENST00000497637 CWF19L2Q2TBE0 894 aaKnown RBP24.37■■□□□ 1.49
ACTN4-208ENST00000497637 NEURL1BA8MQ27 555 aa24.36■■□□□ 1.49
ACTN4-208ENST00000497637 RAD17O75943 681 aa24.36■■□□□ 1.49
ACTN4-208ENST00000497637 KIAA2012Q0VF49 1180 aa24.36■■□□□ 1.49
ACTN4-208ENST00000497637 PPP1R42Q7Z4L9 355 aa24.36■■□□□ 1.49
ACTN4-208ENST00000497637 SLC10A3P09131 477 aa24.35■■□□□ 1.49
ACTN4-208ENST00000497637 ANP32AP39687 249 aaKnown RBP24.35■■□□□ 1.49
ACTN4-208ENST00000497637 DPP8Q6V1X1 898 aaPredicted RBP24.35■■□□□ 1.49
ACTN4-208ENST00000497637 DPF2Q92785 391 aa24.35■■□□□ 1.49
ACTN4-208ENST00000497637 MYD88Q99836 296 aa24.35■■□□□ 1.49
ACTN4-208ENST00000497637 HDAC9Q9UKV0 1011 aa24.35■■□□□ 1.49
ACTN4-208ENST00000497637 GCKRQ14397 625 aa24.34■■□□□ 1.49
ACTN4-208ENST00000497637 BMP2KLQ5H9B9 411 aa24.34■■□□□ 1.49
ACTN4-208ENST00000497637 PLEKHM2Q8IWE5 1019 aa24.34■■□□□ 1.49
ACTN4-208ENST00000497637 MICALL2Q8IY33 904 aa24.34■■□□□ 1.49
ACTN4-208ENST00000497637 DCPSQ96C86 337 aaKnown RBP24.34■■□□□ 1.49
ACTN4-208ENST00000497637 NLRP3Q96P20 1036 aa24.34■■□□□ 1.49
ACTN4-208ENST00000497637 BBOX1O75936 387 aa24.33■■□□□ 1.49
ACTN4-208ENST00000497637 RAB11FIP3O75154 756 aa24.32■■□□□ 1.48
ACTN4-208ENST00000497637 KIF6Q6ZMV9 814 aa24.32■■□□□ 1.48
ACTN4-208ENST00000497637 MPNDQ8N594 471 aa24.32■■□□□ 1.48
ACTN4-208ENST00000497637 MAP3K15Q6ZN16 1313 aa24.32■■□□□ 1.48
ACTN4-208ENST00000497637 TTLL7Q6ZT98 887 aa24.31■■□□□ 1.48
ACTN4-208ENST00000497637 SP8Q8IXZ3 490 aa24.31■■□□□ 1.48
ACTN4-208ENST00000497637 EXOC6BQ9Y2D4 811 aa24.31■■□□□ 1.48
ACTN4-208ENST00000497637 AKAP11Q9UKA4 1901 aa24.3■■□□□ 1.48
ACTN4-208ENST00000497637 SRGAP3O43295 1099 aa24.3■■□□□ 1.48
ACTN4-208ENST00000497637 SMARCA5O60264 1052 aaPredicted RBP24.3■■□□□ 1.48
ACTN4-208ENST00000497637 SUSD4Q5VX71 490 aa24.3■■□□□ 1.48
ACTN4-208ENST00000497637 SUCLG2Q96I99 432 aa24.3■■□□□ 1.48
ACTN4-208ENST00000497637 SLC51AQ86UW1 340 aa24.29■■□□□ 1.48
ACTN4-208ENST00000497637 LRRCC1Q9C099 1032 aa24.29■■□□□ 1.48
ACTN4-208ENST00000497637 NOP58Q9Y2X3 529 aaKnown RBP24.29■■□□□ 1.48
ACTN4-208ENST00000497637 GPTP24298 496 aa24.28■■□□□ 1.48
ACTN4-208ENST00000497637 HSP90AB4PQ58FF6 505 aa24.28■■□□□ 1.48
ACTN4-208ENST00000497637 FBXO46Q6PJ61 603 aaPredicted RBP24.28■■□□□ 1.48
ACTN4-208ENST00000497637 DLK2Q6UY11 383 aa24.28■■□□□ 1.48
ACTN4-208ENST00000497637 SAMD7Q7Z3H4 446 aa24.28■■□□□ 1.48
ACTN4-208ENST00000497637 KAZALD1Q96I82 304 aa24.28■■□□□ 1.48
ACTN4-208ENST00000497637 APBB1O00213 710 aa24.27■■□□□ 1.48
ACTN4-208ENST00000497637 RPS12P25398 132 aaKnown RBP24.27■■□□□ 1.48
ACTN4-208ENST00000497637 NOM1Q5C9Z4 860 aaKnown RBP24.27■■□□□ 1.48
ACTN4-208ENST00000497637 SULF1Q8IWU6 871 aa24.27■■□□□ 1.48
ACTN4-208ENST00000497637 UBN2Q6ZU65 1347 aa24.27■■□□□ 1.48
ACTN4-208ENST00000497637 SHTN1A0MZ66 631 aa24.26■■□□□ 1.47
ACTN4-208ENST00000497637 SURF6O75683 361 aaKnown RBP24.26■■□□□ 1.47
ACTN4-208ENST00000497637 NTSR2O95665 410 aa24.26■■□□□ 1.47
ACTN4-208ENST00000497637 PARP10Q53GL7 1025 aa24.26■■□□□ 1.47
ACTN4-208ENST00000497637 SLC10A5Q5PT55 438 aa24.26■■□□□ 1.47
ACTN4-208ENST00000497637 C3orf67Q6ZVT6 689 aa24.26■■□□□ 1.47
ACTN4-208ENST00000497637 ZNF34Q8IZ26 560 aa24.26■■□□□ 1.47
ACTN4-208ENST00000497637 ZNF296Q8WUU4 475 aaPredicted RBP24.26■■□□□ 1.47
ACTN4-208ENST00000497637 OSBPL3Q9H4L5 887 aa24.26■■□□□ 1.47
ACTN4-208ENST00000497637 YDJCA8MPS7 323 aa24.25■■□□□ 1.47
ACTN4-208ENST00000497637 SEC24BO95487 1268 aa24.25■■□□□ 1.47
ACTN4-208ENST00000497637 FKBP1BP68106 108 aa24.25■■□□□ 1.47
ACTN4-208ENST00000497637 TBC1D10BQ4KMP7 808 aaPredicted RBP24.25■■□□□ 1.47
ACTN4-208ENST00000497637 TTC22Q5TAA0 569 aa24.25■■□□□ 1.47
ACTN4-208ENST00000497637 OTUD7AQ8TE49 926 aaPredicted RBP24.25■■□□□ 1.47
ACTN4-208ENST00000497637 ADM5C9JUS6 153 aa24.24■■□□□ 1.47
ACTN4-208ENST00000497637 ATP5J2-PTCD1G3V325 749 aa24.24■■□□□ 1.47
ACTN4-208ENST00000497637 H7C1W4 665 aa24.24■■□□□ 1.47
ACTN4-208ENST00000497637 ZBTB12Q9Y330 459 aaPredicted RBP24.24■■□□□ 1.47
ACTN4-208ENST00000497637 CASP7P55210 303 aa24.23■■□□□ 1.47
ACTN4-208ENST00000497637 TMC4Q7Z404 712 aa24.23■■□□□ 1.47
ACTN4-208ENST00000497637 RASAL3Q86YV0 1011 aa24.23■■□□□ 1.47
ACTN4-208ENST00000497637 CCDC191Q8NCU4 936 aa24.23■■□□□ 1.47
ACTN4-208ENST00000497637 IPO9Q96P70 1041 aaKnown RBP24.23■■□□□ 1.47
ACTN4-208ENST00000497637 ISCA1Q9BUE6 129 aa24.23■■□□□ 1.47
ACTN4-208ENST00000497637 BICC1Q9H694 974 aaKnown RBP24.23■■□□□ 1.47
ACTN4-208ENST00000497637 CWC25Q9NXE8 425 aaPredicted RBP24.23■■□□□ 1.47
ACTN4-208ENST00000497637 SALL3Q9BXA9 1300 aa24.23■■□□□ 1.47
ACTN4-208ENST00000497637 TRIM28Q13263 835 aaKnown RBP24.22■■□□□ 1.47
ACTN4-208ENST00000497637 TCIRG1Q13488 830 aa24.22■■□□□ 1.47
ACTN4-208ENST00000497637 RHPN1Q8TCX5 695 aa24.22■■□□□ 1.47
ACTN4-208ENST00000497637 KIF1BPQ96EK5 621 aa24.22■■□□□ 1.47
ACTN4-208ENST00000497637 PSMD14O00487 310 aa24.21■■□□□ 1.47
ACTN4-208ENST00000497637 GSPT1P15170 499 aaKnown RBP24.21■■□□□ 1.47
ACTN4-208ENST00000497637 PDE1AP54750 535 aa24.21■■□□□ 1.47
ACTN4-208ENST00000497637 GIGYF2Q6Y7W6 1299 aaKnown RBP24.21■■□□□ 1.47
ACTN4-208ENST00000497637 UTP14AQ9BVJ6 771 aaKnown RBP24.21■■□□□ 1.47
ACTN4-208ENST00000497637 ZBTB3Q9H5J0 574 aa24.21■■□□□ 1.47
ACTN4-208ENST00000497637 STAP2Q9UGK3 403 aa24.21■■□□□ 1.47
ACTN4-208ENST00000497637 FXR1P51114 621 aaKnown RBP eCLIP24.2■■□□□ 1.46
ACTN4-208ENST00000497637 RABL6Q3YEC7 729 aaPredicted RBP24.2■■□□□ 1.46
ACTN4-208ENST00000497637 RBM26Q5T8P6 1007 aaKnown RBP24.2■■□□□ 1.46
ACTN4-208ENST00000497637 TBC1D8O95759 1140 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms