RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 CHMP4AQ9BY43 222 aa22.5■■□□□ 1.19
MCF2L-226ENST00000486210 MYOZ2Q9NPC6 264 aa22.5■■□□□ 1.19
MCF2L-226ENST00000486210 PITPNM2Q9BZ72 1349 aa22.5■■□□□ 1.19
MCF2L-226ENST00000486210 JARID2Q92833 1246 aaPredicted RBP22.49■■□□□ 1.19
MCF2L-226ENST00000486210 CCDC85AQ96PX6 553 aaPredicted RBP22.49■■□□□ 1.19
MCF2L-226ENST00000486210 MYD88Q99836 296 aa22.49■■□□□ 1.19
MCF2L-226ENST00000486210 HPS5Q9UPZ3 1129 aa22.49■■□□□ 1.19
MCF2L-226ENST00000486210 SPEF2Q9C093 1822 aa22.49■■□□□ 1.19
MCF2L-226ENST00000486210 WTIPA6NIX2 430 aaPredicted RBP22.48■■□□□ 1.19
MCF2L-226ENST00000486210 PCCAP05165 728 aaPredicted RBP22.48■■□□□ 1.19
MCF2L-226ENST00000486210 USP17L8P0C7I0 530 aa22.48■■□□□ 1.19
MCF2L-226ENST00000486210 HSP90B1P14625 803 aaKnown RBP22.48■■□□□ 1.19
MCF2L-226ENST00000486210 CCDC152Q4G0S7 254 aa22.48■■□□□ 1.19
MCF2L-226ENST00000486210 PDE8AO60658 829 aa22.47■■□□□ 1.19
MCF2L-226ENST00000486210 TWISTNBQ3B726 338 aaPredicted RBP22.47■■□□□ 1.19
MCF2L-226ENST00000486210 PRAMEF18Q5VWM3 479 aa22.47■■□□□ 1.19
MCF2L-226ENST00000486210 XDHP47989 1333 aa22.47■■□□□ 1.19
MCF2L-226ENST00000486210 UBE2Q2LH0YL09 131 aa22.46■■□□□ 1.19
MCF2L-226ENST00000486210 TBC1D8O95759 1140 aa22.46■■□□□ 1.19
MCF2L-226ENST00000486210 CCDC191Q8NCU4 936 aa22.46■■□□□ 1.19
MCF2L-226ENST00000486210 ZNF296Q8WUU4 475 aaPredicted RBP22.46■■□□□ 1.19
MCF2L-226ENST00000486210 USP17L3A6NCW0 530 aa22.45■■□□□ 1.18
MCF2L-226ENST00000486210 USP17L4A6NCW7 530 aa22.45■■□□□ 1.18
MCF2L-226ENST00000486210 VAMP4O75379 141 aa22.45■■□□□ 1.18
MCF2L-226ENST00000486210 NBPF9Q3BBW0 867 aa22.45■■□□□ 1.18
MCF2L-226ENST00000486210 PRPF38BQ5VTL8 546 aaKnown RBP22.45■■□□□ 1.18
MCF2L-226ENST00000486210 USP17L1Q7RTZ2 530 aa22.45■■□□□ 1.18
MCF2L-226ENST00000486210 PODNQ7Z5L7 613 aa22.45■■□□□ 1.18
MCF2L-226ENST00000486210 MYH3P11055 1940 aa22.45■■□□□ 1.18
MCF2L-226ENST00000486210 ATP2B4P23634 1241 aa22.44■■□□□ 1.18
MCF2L-226ENST00000486210 ANKRD18AQ8IVF6 992 aa22.44■■□□□ 1.18
MCF2L-226ENST00000486210 MXD3Q9BW11 206 aa22.44■■□□□ 1.18
MCF2L-226ENST00000486210 CWC25Q9NXE8 425 aaPredicted RBP22.43■■□□□ 1.18
MCF2L-226ENST00000486210 MED23Q9ULK4 1368 aa22.42■■□□□ 1.18
MCF2L-226ENST00000486210 DDX58O95786 925 aaKnown RBP22.42■■□□□ 1.18
MCF2L-226ENST00000486210 TM4SF4P48230 202 aa22.42■■□□□ 1.18
MCF2L-226ENST00000486210 PKN2Q16513 984 aaKnown RBP22.42■■□□□ 1.18
MCF2L-226ENST00000486210 METTL22Q9BUU2 404 aaPredicted RBP22.42■■□□□ 1.18
MCF2L-226ENST00000486210 HDAC9Q9UKV0 1011 aa22.42■■□□□ 1.18
MCF2L-226ENST00000486210 WNT10BO00744 389 aa22.41■■□□□ 1.18
MCF2L-226ENST00000486210 DACT2Q5SW24 774 aa22.41■■□□□ 1.18
MCF2L-226ENST00000486210 CCDC30Q5VVM6 783 aa22.41■■□□□ 1.18
MCF2L-226ENST00000486210 MINPP1Q9UNW1 487 aa22.4■■□□□ 1.18
MCF2L-226ENST00000486210 GPR25O00155 361 aa22.39■■□□□ 1.17
MCF2L-226ENST00000486210 CTSWP56202 376 aa22.39■■□□□ 1.17
MCF2L-226ENST00000486210 MKRN3Q13064 507 aaKnown RBP22.39■■□□□ 1.17
MCF2L-226ENST00000486210 NOM1Q5C9Z4 860 aaKnown RBP22.38■■□□□ 1.17
MCF2L-226ENST00000486210 TXNRD3Q86VQ6 643 aa22.38■■□□□ 1.17
MCF2L-226ENST00000486210 TTLL11Q8NHH1 800 aa22.38■■□□□ 1.17
MCF2L-226ENST00000486210 R3HDMLQ9H3Y0 253 aa22.38■■□□□ 1.17
MCF2L-226ENST00000486210 IGKV5-2P06315 115 aa22.37■■□□□ 1.17
MCF2L-226ENST00000486210 TTLL12Q14166 644 aaPredicted RBP22.37■■□□□ 1.17
MCF2L-226ENST00000486210 CDC5LQ99459 802 aaKnown RBP22.37■■□□□ 1.17
MCF2L-226ENST00000486210 GREM2Q9H772 168 aa22.37■■□□□ 1.17
MCF2L-226ENST00000486210 BSDC1Q9NW68 430 aaPredicted RBP22.37■■□□□ 1.17
MCF2L-226ENST00000486210 SASH1O94885 1247 aa22.36■■□□□ 1.17
MCF2L-226ENST00000486210 CCT4P50991 539 aaKnown RBP22.36■■□□□ 1.17
MCF2L-226ENST00000486210 PTPN12Q05209 780 aaKnown RBP22.36■■□□□ 1.17
MCF2L-226ENST00000486210 STRIP1Q5VSL9 837 aa22.36■■□□□ 1.17
MCF2L-226ENST00000486210 CFHR5Q9BXR6 569 aa22.36■■□□□ 1.17
MCF2L-226ENST00000486210 STK31Q9BXU1 1019 aa22.36■■□□□ 1.17
MCF2L-226ENST00000486210 MAP3K2Q9Y2U5 619 aa22.36■■□□□ 1.17
MCF2L-226ENST00000486210 FBXO46Q6PJ61 603 aaPredicted RBP22.35■■□□□ 1.17
MCF2L-226ENST00000486210 OGFOD1Q8N543 542 aa22.35■■□□□ 1.17
MCF2L-226ENST00000486210 FBXW7Q969H0 707 aa22.35■■□□□ 1.17
MCF2L-226ENST00000486210 COA1Q9GZY4 146 aa22.35■■□□□ 1.17
MCF2L-226ENST00000486210 LAMB1P07942 1786 aa22.35■■□□□ 1.17
MCF2L-226ENST00000486210 MYO3BQ8WXR4 1341 aa22.34■■□□□ 1.17
MCF2L-226ENST00000486210 NF2P35240 595 aa22.34■■□□□ 1.17
MCF2L-226ENST00000486210 PRKG1Q13976 671 aa22.34■■□□□ 1.17
MCF2L-226ENST00000486210 CT47B1P0C2W7 299 aaPredicted RBP22.33■■□□□ 1.17
MCF2L-226ENST00000486210 KLRK1P26718 216 aa22.33■■□□□ 1.17
MCF2L-226ENST00000486210 NEXNQ0ZGT2 675 aa22.33■■□□□ 1.17
MCF2L-226ENST00000486210 SREBF2Q12772 1141 aa22.33■■□□□ 1.17
MCF2L-226ENST00000486210 ZBED3Q96IU2 234 aaPredicted RBP22.33■■□□□ 1.17
MCF2L-226ENST00000486210 FZD1Q9UP38 647 aa22.33■■□□□ 1.17
MCF2L-226ENST00000486210 PI4KAP2A4QPH2 592 aa22.32■■□□□ 1.16
MCF2L-226ENST00000486210 FKTNO75072 461 aa22.32■■□□□ 1.16
MCF2L-226ENST00000486210 LDLRAD1Q5T700 205 aa22.32■■□□□ 1.16
MCF2L-226ENST00000486210 KSR2Q6VAB6 950 aa22.32■■□□□ 1.16
MCF2L-226ENST00000486210 PI4KAP1Q8N8J0 262 aa22.32■■□□□ 1.16
MCF2L-226ENST00000486210 SSH1Q8WYL5 1049 aa22.32■■□□□ 1.16
MCF2L-226ENST00000486210 ECM29Q5VYK3 1845 aa22.31■■□□□ 1.16
MCF2L-226ENST00000486210 SLC4A2P04920 1241 aa22.31■■□□□ 1.16
MCF2L-226ENST00000486210 CWF19L2Q2TBE0 894 aaKnown RBP22.31■■□□□ 1.16
MCF2L-226ENST00000486210 SPRYD7Q5W111 196 aa22.31■■□□□ 1.16
MCF2L-226ENST00000486210 G2E3Q7L622 706 aa22.31■■□□□ 1.16
MCF2L-226ENST00000486210 ARMC9Q7Z3E5 817 aa22.31■■□□□ 1.16
MCF2L-226ENST00000486210 RARSP54136 660 aaKnown RBP22.3■■□□□ 1.16
MCF2L-226ENST00000486210 TTLL5Q6EMB2 1281 aa22.3■■□□□ 1.16
MCF2L-226ENST00000486210 KIAA0825Q8IV33 1275 aa22.3■■□□□ 1.16
MCF2L-226ENST00000486210 MRPL50Q8N5N7 158 aaKnown RBP22.3■■□□□ 1.16
MCF2L-226ENST00000486210 LEMD3Q9Y2U8 911 aa22.3■■□□□ 1.16
MCF2L-226ENST00000486210 SSC5DA1L4H1 1573 aa22.29■■□□□ 1.16
MCF2L-226ENST00000486210 APOBEC3FQ8IUX4 373 aaKnown RBP22.29■■□□□ 1.16
MCF2L-226ENST00000486210 ANGEL1Q9UNK9 670 aaKnown RBP22.29■■□□□ 1.16
MCF2L-226ENST00000486210 A0A1B0GUL6 1792 aa22.28■■□□□ 1.16
MCF2L-226ENST00000486210 NEURL1BA8MQ27 555 aa22.28■■□□□ 1.16
MCF2L-226ENST00000486210 MMP14P50281 582 aa22.28■■□□□ 1.16
MCF2L-226ENST00000486210 ALDH1L2Q3SY69 923 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms