RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 SRGAP3O43295 1099 aa22.06■■□□□ 1.12
RPUSD3-214ENST00000473522 RPS12P25398 132 aaKnown RBP22.06■■□□□ 1.12
RPUSD3-214ENST00000473522 EPS15P42566 896 aa22.06■■□□□ 1.12
RPUSD3-214ENST00000473522 GMPSP49915 693 aaPredicted RBP22.06■■□□□ 1.12
RPUSD3-214ENST00000473522 FSTL1Q12841 308 aa22.06■■□□□ 1.12
RPUSD3-214ENST00000473522 PNMA8AQ86V59 439 aaPredicted RBP22.06■■□□□ 1.12
RPUSD3-214ENST00000473522 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.06■■□□□ 1.12
RPUSD3-214ENST00000473522 LMOD1P29536 600 aaPredicted RBP22.05■■□□□ 1.12
RPUSD3-214ENST00000473522 ATP8B2P98198 1209 aa22.05■■□□□ 1.12
RPUSD3-214ENST00000473522 METTL24Q5JXM2 366 aa22.05■■□□□ 1.12
RPUSD3-214ENST00000473522 CD209Q9NNX6 404 aa22.05■■□□□ 1.12
RPUSD3-214ENST00000473522 MYH3P11055 1940 aa22.05■■□□□ 1.12
RPUSD3-214ENST00000473522 TIAM2Q8IVF5 1701 aa22.05■■□□□ 1.12
RPUSD3-214ENST00000473522 USP17L3A6NCW0 530 aa22.04■■□□□ 1.12
RPUSD3-214ENST00000473522 USP17L4A6NCW7 530 aa22.04■■□□□ 1.12
RPUSD3-214ENST00000473522 IL15P40933 162 aaPredicted RBP22.04■■□□□ 1.12
RPUSD3-214ENST00000473522 MVPQ14764 893 aaKnown RBP22.04■■□□□ 1.12
RPUSD3-214ENST00000473522 USP17L1Q7RTZ2 530 aa22.04■■□□□ 1.12
RPUSD3-214ENST00000473522 SMC1BQ8NDV3 1235 aa22.04■■□□□ 1.12
RPUSD3-214ENST00000473522 ZBTB12Q9Y330 459 aaPredicted RBP22.04■■□□□ 1.12
RPUSD3-214ENST00000473522 CCDC88AQ3V6T2 1871 aa22.04■■□□□ 1.12
RPUSD3-214ENST00000473522 IL1R1P14778 569 aa22.03■■□□□ 1.12
RPUSD3-214ENST00000473522 FGFR2P21802 821 aa22.03■■□□□ 1.12
RPUSD3-214ENST00000473522 STRIP1Q5VSL9 837 aa22.03■■□□□ 1.12
RPUSD3-214ENST00000473522 USP50Q70EL3 339 aaPredicted RBP22.03■■□□□ 1.12
RPUSD3-214ENST00000473522 FAM84BQ96KN1 310 aaPredicted RBP22.03■■□□□ 1.12
RPUSD3-214ENST00000473522 GMLQ99445 158 aa22.03■■□□□ 1.12
RPUSD3-214ENST00000473522 CNOT7Q9UIV1 285 aaKnown RBP22.03■■□□□ 1.12
RPUSD3-214ENST00000473522 PA2G4Q9UQ80 394 aaKnown RBP22.03■■□□□ 1.12
RPUSD3-214ENST00000473522 PNMA6EA0A0J9YXQ4 647 aa22.02■■□□□ 1.12
RPUSD3-214ENST00000473522 POTEIP0CG38 1075 aa22.02■■□□□ 1.12
RPUSD3-214ENST00000473522 POTEJP0CG39 1038 aa22.02■■□□□ 1.12
RPUSD3-214ENST00000473522 POLA2Q14181 598 aa22.02■■□□□ 1.12
RPUSD3-214ENST00000473522 RSBN1LQ6PCB5 846 aaPredicted RBP22.02■■□□□ 1.12
RPUSD3-214ENST00000473522 LDHDQ86WU2 507 aa22.02■■□□□ 1.12
RPUSD3-214ENST00000473522 AGBL3Q8NEM8 1001 aa22.02■■□□□ 1.12
RPUSD3-214ENST00000473522 SSH3Q8TE77 659 aa22.02■■□□□ 1.12
RPUSD3-214ENST00000473522 ADARB2Q9NS39 739 aaKnown RBP22.02■■□□□ 1.12
RPUSD3-214ENST00000473522 DDX19BQ9UMR2 479 aa22.02■■□□□ 1.12
RPUSD3-214ENST00000473522 DACT2Q5SW24 774 aa22.01■■□□□ 1.11
RPUSD3-214ENST00000473522 ZNF804AQ7Z570 1209 aa22.01■■□□□ 1.11
RPUSD3-214ENST00000473522 FBXO33Q7Z6M2 555 aa22.01■■□□□ 1.11
RPUSD3-214ENST00000473522 SIL1Q9H173 461 aa22.01■■□□□ 1.11
RPUSD3-214ENST00000473522 ZBTB40Q9NUA8 1239 aa22.01■■□□□ 1.11
RPUSD3-214ENST00000473522 CEP126Q9P2H0 1117 aa22.01■■□□□ 1.11
RPUSD3-214ENST00000473522 COG6Q9Y2V7 657 aa22.01■■□□□ 1.11
RPUSD3-214ENST00000473522 SASH1O94885 1247 aa22■■□□□ 1.11
RPUSD3-214ENST00000473522 HIBADHP31937 336 aaKnown RBP22■■□□□ 1.11
RPUSD3-214ENST00000473522 PUM3Q15397 648 aaKnown RBP22■■□□□ 1.11
RPUSD3-214ENST00000473522 C20orf194Q5TEA3 1177 aa22■■□□□ 1.11
RPUSD3-214ENST00000473522 TTLL5Q6EMB2 1281 aa22■■□□□ 1.11
RPUSD3-214ENST00000473522 CHADLQ6NUI6 762 aa22■■□□□ 1.11
RPUSD3-214ENST00000473522 CHMP4BQ9H444 224 aaKnown RBP22■■□□□ 1.11
RPUSD3-214ENST00000473522 ZNF609O15014 1411 aa21.99■■□□□ 1.11
RPUSD3-214ENST00000473522 H7C1D1 291 aa21.99■■□□□ 1.11
RPUSD3-214ENST00000473522 TDRD7Q8NHU6 1098 aaKnown RBP21.99■■□□□ 1.11
RPUSD3-214ENST00000473522 LPIN2Q92539 896 aa21.99■■□□□ 1.11
RPUSD3-214ENST00000473522 PGAP2Q9UHJ9 254 aa21.99■■□□□ 1.11
RPUSD3-214ENST00000473522 GYG1P46976 350 aa21.98■■□□□ 1.11
RPUSD3-214ENST00000473522 MMP14P50281 582 aa21.98■■□□□ 1.11
RPUSD3-214ENST00000473522 ZNF280AP59817 542 aaPredicted RBP21.98■■□□□ 1.11
RPUSD3-214ENST00000473522 EAPPQ56P03 285 aaPredicted RBP21.98■■□□□ 1.11
RPUSD3-214ENST00000473522 MICALL2Q8IY33 904 aa21.98■■□□□ 1.11
RPUSD3-214ENST00000473522 C1orf115Q9H7X2 142 aa21.98■■□□□ 1.11
RPUSD3-214ENST00000473522 IFIT1P09914 478 aaKnown RBP21.97■■□□□ 1.11
RPUSD3-214ENST00000473522 HIRAP54198 1017 aaPredicted RBP21.97■■□□□ 1.11
RPUSD3-214ENST00000473522 GTF2IP78347 998 aa21.97■■□□□ 1.11
RPUSD3-214ENST00000473522 CEP85Q6P2H3 762 aa21.97■■□□□ 1.11
RPUSD3-214ENST00000473522 ZC3H15Q8WU90 426 aaKnown RBP21.97■■□□□ 1.11
RPUSD3-214ENST00000473522 NOP58Q9Y2X3 529 aaKnown RBP21.97■■□□□ 1.11
RPUSD3-214ENST00000473522 SHTN1A0MZ66 631 aa21.96■■□□□ 1.11
RPUSD3-214ENST00000473522 FKBP1AP62942 108 aaKnown RBP21.96■■□□□ 1.11
RPUSD3-214ENST00000473522 CAVIN4Q5BKX8 364 aa21.96■■□□□ 1.11
RPUSD3-214ENST00000473522 MYO3BQ8WXR4 1341 aa21.96■■□□□ 1.11
RPUSD3-214ENST00000473522 ZBTB22O15209 634 aa21.95■■□□□ 1.1
RPUSD3-214ENST00000473522 ITGBL1O95965 494 aaPredicted RBP21.95■■□□□ 1.1
RPUSD3-214ENST00000473522 USP17L8P0C7I0 530 aa21.95■■□□□ 1.1
RPUSD3-214ENST00000473522 HSPA6P17066 643 aa21.95■■□□□ 1.1
RPUSD3-214ENST00000473522 RPAP2Q8IXW5 612 aaPredicted RBP21.95■■□□□ 1.1
RPUSD3-214ENST00000473522 CLEC11AQ9Y240 323 aa21.95■■□□□ 1.1
RPUSD3-214ENST00000473522 FAM205AQ6ZU69 1335 aa21.95■■□□□ 1.1
RPUSD3-214ENST00000473522 SLC5A1P13866 664 aa21.94■■□□□ 1.1
RPUSD3-214ENST00000473522 BCAMP50895 628 aa21.94■■□□□ 1.1
RPUSD3-214ENST00000473522 G3BP1Q13283 466 aaKnown RBP eCLIP21.94■■□□□ 1.1
RPUSD3-214ENST00000473522 SAMD7Q7Z3H4 446 aa21.94■■□□□ 1.1
RPUSD3-214ENST00000473522 MXD3Q9BW11 206 aa21.94■■□□□ 1.1
RPUSD3-214ENST00000473522 TFCP2Q12800 502 aa21.93■■□□□ 1.1
RPUSD3-214ENST00000473522 ATP2B3Q16720 1220 aa21.93■■□□□ 1.1
RPUSD3-214ENST00000473522 CNTROBQ8N137 903 aa21.93■■□□□ 1.1
RPUSD3-214ENST00000473522 TRPM4Q8TD43 1214 aa21.93■■□□□ 1.1
RPUSD3-214ENST00000473522 AKAP2Q9Y2D5 859 aa21.93■■□□□ 1.1
RPUSD3-214ENST00000473522 SCN4AP35499 1836 aa21.92■■□□□ 1.1
RPUSD3-214ENST00000473522 EGFRP00533 1210 aa21.92■■□□□ 1.1
RPUSD3-214ENST00000473522 RRP1P56182 461 aaKnown RBP21.92■■□□□ 1.1
RPUSD3-214ENST00000473522 VPS37DQ86XT2 251 aa21.92■■□□□ 1.1
RPUSD3-214ENST00000473522 SURF6O75683 361 aaKnown RBP21.91■■□□□ 1.1
RPUSD3-214ENST00000473522 TIMM10P62072 90 aa21.91■■□□□ 1.1
RPUSD3-214ENST00000473522 MAP1SQ66K74 1059 aaPredicted RBP21.91■■□□□ 1.1
RPUSD3-214ENST00000473522 CERS5Q8N5B7 392 aa21.91■■□□□ 1.1
RPUSD3-214ENST00000473522 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms