RNA–Protein interactions for RNA: ENST00000380665.3

CDCA2-202, Transcript of cell division cycle associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCA2, Length 3,565 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-202ENST00000380665 IGSF3O75054 1194 aa15.21■□□□□ 0.03
CDCA2-202ENST00000380665 HSPD1P10809 573 aaKnown RBP15.21■□□□□ 0.03
CDCA2-202ENST00000380665 GREM2Q9H772 168 aa15.21■□□□□ 0.03
CDCA2-202ENST00000380665 SPDYE4A6NLX3 237 aa15.21■□□□□ 0.02
CDCA2-202ENST00000380665 HLFQ16534 295 aa15.21■□□□□ 0.02
CDCA2-202ENST00000380665 HOMER1Q86YM7 354 aa15.21■□□□□ 0.02
CDCA2-202ENST00000380665 USP28Q96RU2 1077 aa15.21■□□□□ 0.02
CDCA2-202ENST00000380665 NAPBQ9H115 298 aa15.21■□□□□ 0.02
CDCA2-202ENST00000380665 PRDM1O75626 825 aa15.2■□□□□ 0.02
CDCA2-202ENST00000380665 OFD1O75665 1012 aa15.2■□□□□ 0.02
CDCA2-202ENST00000380665 AKAP17AQ02040 695 aaKnown RBP15.2■□□□□ 0.02
CDCA2-202ENST00000380665 LRRFIP1Q32MZ4 808 aaKnown RBP15.2■□□□□ 0.02
CDCA2-202ENST00000380665 OSBP2Q969R2 916 aa15.2■□□□□ 0.02
CDCA2-202ENST00000380665 HMG20BQ9P0W2 317 aa15.2■□□□□ 0.02
CDCA2-202ENST00000380665 DENND2AQ9ULE3 1009 aa15.2■□□□□ 0.02
CDCA2-202ENST00000380665 RPAP1Q9BWH6 1393 aaPredicted RBP15.2■□□□□ 0.02
CDCA2-202ENST00000380665 NPHP4O75161 1426 aaPredicted RBP15.2■□□□□ 0.02
CDCA2-202ENST00000380665 M0R2C6 588 aa15.2■□□□□ 0.02
CDCA2-202ENST00000380665 EXOC5O00471 708 aa15.2■□□□□ 0.02
CDCA2-202ENST00000380665 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDCA2-202ENST00000380665 IFIT3O14879 490 aaKnown RBP15.2■□□□□ 0.02
CDCA2-202ENST00000380665 ADD1P35611 737 aaKnown RBP15.2■□□□□ 0.02
CDCA2-202ENST00000380665 STOX1Q6ZVD7 989 aa15.2■□□□□ 0.02
CDCA2-202ENST00000380665 ZNF396Q96N95 335 aaPredicted RBP15.2■□□□□ 0.02
CDCA2-202ENST00000380665 SLC26A6Q9BXS9 759 aa15.2■□□□□ 0.02
CDCA2-202ENST00000380665 COPRSQ9NQ92 184 aa15.2■□□□□ 0.02
CDCA2-202ENST00000380665 SLAIN2Q9P270 581 aa15.2■□□□□ 0.02
CDCA2-202ENST00000380665 GPAA1O43292 621 aa15.19■□□□□ 0.02
CDCA2-202ENST00000380665 CDK11BP21127 795 aaKnown RBP15.19■□□□□ 0.02
CDCA2-202ENST00000380665 CBX8Q9HC52 389 aa15.19■□□□□ 0.02
CDCA2-202ENST00000380665 TPM2P07951 284 aa15.19■□□□□ 0.02
CDCA2-202ENST00000380665 CTDSPL2Q05D32 466 aa15.19■□□□□ 0.02
CDCA2-202ENST00000380665 DZIP3Q86Y13 1208 aaKnown RBP15.19■□□□□ 0.02
CDCA2-202ENST00000380665 AOPEPQ8N6M6 819 aa15.19■□□□□ 0.02
CDCA2-202ENST00000380665 ZBTB1Q9Y2K1 713 aa15.19■□□□□ 0.02
CDCA2-202ENST00000380665 CEMIPQ8WUJ3 1361 aa15.19■□□□□ 0.02
CDCA2-202ENST00000380665 ITSN1Q15811 1721 aa15.19■□□□□ 0.02
CDCA2-202ENST00000380665 ZNF335Q9H4Z2 1342 aaPredicted RBP15.19■□□□□ 0.02
CDCA2-202ENST00000380665 CBX1P83916 185 aa15.19■□□□□ 0.02
CDCA2-202ENST00000380665 PUS7LQ9H0K6 701 aaKnown RBP15.19■□□□□ 0.02
CDCA2-202ENST00000380665 KLHL10Q6JEL2 608 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 MAGEB6Q8N7X4 407 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 FAM200AQ8TCP9 573 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 GTF3C6Q969F1 213 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 PYCARDQ9ULZ3 195 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 CCDC69A6NI79 296 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 ARMT1Q9H993 441 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 AKAP2Q9Y2D5 859 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 ERICH2A1L162 156 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 RANBP6O60518 1105 aaKnown RBP15.18■□□□□ 0.02
CDCA2-202ENST00000380665 FGAP02671 866 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 LMOD1P29536 600 aaPredicted RBP15.18■□□□□ 0.02
CDCA2-202ENST00000380665 ST3GAL1Q11201 340 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 TMEM67Q5HYA8 995 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 HAUS7Q99871 368 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 CTNNA3Q9UI47 895 aa15.18■□□□□ 0.02
CDCA2-202ENST00000380665 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
CDCA2-202ENST00000380665 MAST3O60307 1309 aa15.17■□□□□ 0.02
CDCA2-202ENST00000380665 ATP6V1AP38606 617 aa15.17■□□□□ 0.02
CDCA2-202ENST00000380665 GOLGA8AA7E2F4 631 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 PHKA1P46020 1223 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 METAP2P50579 478 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDCA2-202ENST00000380665 MTX1Q13505 466 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 ARID5BQ14865 1188 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 PEAK1Q9H792 1746 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 PCDH11XQ9BZA7 1347 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 PCDH11YQ9BZA8 1340 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 SSH2Q76I76 1423 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 SERPINC1P01008 464 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 MCM5P33992 734 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 NCOA7Q8NI08 942 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 ALG1Q9BT22 464 aa15.16■□□□□ 0.02
CDCA2-202ENST00000380665 NIP7Q9Y221 180 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDCA2-202ENST00000380665 BRINP3Q76B58 766 aa15.15■□□□□ 0.02
CDCA2-202ENST00000380665 PIGBQ92521 554 aa15.15■□□□□ 0.02
CDCA2-202ENST00000380665 TM6SF1Q9BZW5 370 aa15.15■□□□□ 0.02
CDCA2-202ENST00000380665 MBD4O95243 580 aa15.15■□□□□ 0.02
CDCA2-202ENST00000380665 DDX19AQ9NUU7 478 aaKnown RBP15.15■□□□□ 0.02
CDCA2-202ENST00000380665 DHX16O60231 1041 aaKnown RBP15.14■□□□□ 0.01
CDCA2-202ENST00000380665 TCIRG1Q13488 830 aa15.14■□□□□ 0.01
CDCA2-202ENST00000380665 CEP57L1Q8IYX8 460 aa15.14■□□□□ 0.01
CDCA2-202ENST00000380665 CCDC191Q8NCU4 936 aa15.14■□□□□ 0.01
CDCA2-202ENST00000380665 RGPD8O14715 1765 aaPredicted RBP15.14■□□□□ 0.01
CDCA2-202ENST00000380665 ADGRL3Q9HAR2 1447 aa15.14■□□□□ 0.01
CDCA2-202ENST00000380665 SAFBQ15424 915 aaKnown RBP eCLIP15.14■□□□□ 0.015e-7■■□□□ 12.1
CDCA2-202ENST00000380665 PGBD1Q96JS3 809 aa15.14■□□□□ 0.01
CDCA2-202ENST00000380665 NRDCO43847 1150 aa15.14■□□□□ 0.01
CDCA2-202ENST00000380665 TNNT1P13805 278 aa15.14■□□□□ 0.01
CDCA2-202ENST00000380665 TPM4P67936 248 aa15.14■□□□□ 0.01
CDCA2-202ENST00000380665 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
CDCA2-202ENST00000380665 TMC6Q7Z403 805 aa15.14■□□□□ 0.01
CDCA2-202ENST00000380665 SLC12A7Q9Y666 1083 aa15.14■□□□□ 0.01
CDCA2-202ENST00000380665 ZNF532Q9HCE3 1301 aa15.13■□□□□ 0.01
CDCA2-202ENST00000380665 HMGN5P82970 282 aaKnown RBP15.13■□□□□ 0.01
CDCA2-202ENST00000380665 KCNJ14Q9UNX9 436 aa15.13■□□□□ 0.01
CDCA2-202ENST00000380665 ANKARQ7Z5J8 1434 aa15.13■□□□□ 0.01
CDCA2-202ENST00000380665 PRKAB2O43741 272 aa15.13■□□□□ 0.01
CDCA2-202ENST00000380665 IGHMBP2P38935 993 aaKnown RBP15.13■□□□□ 0.01
CDCA2-202ENST00000380665 CLEC17AQ6ZS10 378 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms