RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 LOC102724200A0A096LPH7 203 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-227ENST00000638011 OTX2P32243 289 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 CD96P40200 585 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 CD226Q15762 336 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 GDF7Q7Z4P5 450 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 CALHM3Q86XJ0 350 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 C19orf43Q9BQ61 176 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 UQCR10Q9UDW1 63 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 ZAR1LA6NP61 321 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 LMX1BO60663 402 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 ACTL6AO96019 429 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 BCL3P20749 454 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 H1FNTQ75WM6 255 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-227ENST00000638011 CD99L2Q8TCZ2 262 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 RTN4IP1Q8WWV3 396 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-227ENST00000638011 DNAJA3Q96EY1 480 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 ZNF107Q9UII5 783 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-227ENST00000638011 A0A1W2PP55 124 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 A0A1W2PQU0 124 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 SSX1Q16384 188 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 PISDQ9UG56 409 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 WNT6Q9Y6F9 365 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 ACACAQ13085 2346 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 ZNF840PA6NDX5 716 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 SH2D7A6NKC9 451 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-227ENST00000638011 PRAMEF26H0Y7S4 382 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 CRHP06850 196 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 DGCR2P98153 550 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 TEAD2Q15562 447 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 CAMKMTQ7Z624 323 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 CASP8AP2Q9UKL3 1982 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 IL13RA2Q14627 380 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 YIPF6Q96EC8 236 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 SLC25A33Q9BSK2 321 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 UQCC1Q9NVA1 299 aa13.76□□□□□ -0.21
UBE3A-227ENST00000638011 ACAA1P09110 424 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-227ENST00000638011 ARR3P36575 388 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 DCXRQ7Z4W1 244 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 TMEM70Q9BUB7 260 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 SEBOXQ9HB31 216 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-227ENST00000638011 IL17CQ9P0M4 197 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 CLEC2DQ9UHP7 191 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 SLC5A10A0PJK1 596 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 RAB38P57729 211 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 SLC25A19Q9HC21 320 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 AMDHD2Q9Y303 409 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 MMACHCQ9Y4U1 282 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 M0QZ24 198 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 INPP5JQ15735 1006 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-227ENST00000638011 CGB2Q6NT52 195 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 DTD2Q96FN9 168 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 FOXJ3Q9UPW0 622 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 ZNF646O15015 1829 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-227ENST00000638011 TRAV34A0A0B4J273 112 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 RBFOX3A6NFN3 312 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 ZNF737O75373 536 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 GPNMBQ14956 572 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 CLEC12BQ2HXU8 276 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 CXorf65A6NEN9 183 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 SMAD6O43541 496 aaKnown RBP13.75□□□□□ -0.21
UBE3A-227ENST00000638011 ADRA1AP35348 466 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 MRM1Q6IN84 353 aaKnown RBP13.75□□□□□ -0.21
UBE3A-227ENST00000638011 TIMD4Q96H15 378 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 TMEM167BQ9NRX6 74 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 G3V3Y1 287 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 NDUFB6O95139 128 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 FGF9P31371 208 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-227ENST00000638011 PRDX1Q06830 199 aaKnown RBP13.75□□□□□ -0.21
UBE3A-227ENST00000638011 CNEP1R1Q8N9A8 125 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 ACY3Q96HD9 319 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 CHRNA10Q9GZZ6 450 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 SPANXA1Q9NS26 97 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 LOC107986453A0A1B0GWG9 222 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 XRCC2O43543 280 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 TRAT1Q6PIZ9 186 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 APCDD1Q8J025 514 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 OR8B4Q96RC9 309 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 LYRM4Q9HD34 91 aa13.75□□□□□ -0.21
UBE3A-227ENST00000638011 AKR7A2O43488 359 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 TMEM11P17152 192 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 CSF3RQ99062 836 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 A6NL46 340 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 RIGQ13278 110 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 LILRB1Q8NHL6 650 aaPredicted RBP13.74□□□□□ -0.21
UBE3A-227ENST00000638011 CHST11Q9NPF2 352 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 TCF21O43680 179 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 NTSR1P30989 418 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 C19orf57Q0VDD7 668 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 UBE2V2Q15819 145 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 C3orf30Q96M34 536 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 TMEM56Q96MV1 263 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 GPX7Q96SL4 187 aaPredicted RBP13.74□□□□□ -0.21
UBE3A-227ENST00000638011 UBTD1Q9HAC8 227 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 CHST2Q9Y4C5 530 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 C15orf39Q6ZRI6 1047 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 FAM24BQ8N5W8 94 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 OR5D18Q8NGL1 313 aa13.74□□□□□ -0.21
UBE3A-227ENST00000638011 EIF4E2O60573 245 aaKnown RBP13.74□□□□□ -0.21
UBE3A-227ENST00000638011 TEAD3Q99594 435 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms