RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 DCDC5Q6ZRR9 648 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 ZNF826PQ6ZT77 177 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 USP43Q70EL4 1123 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 RHOUQ7L0Q8 258 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 ASRGL1Q7L266 308 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 BPIFB2Q8N4F0 458 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 ZNF454Q8N9F8 522 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 BOLLQ8N9W6 283 aaKnown RBP11.59□□□□□ -0.55
APOC1-208ENST00000592535 SPERTQ8NA61 448 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 OR5K1Q8NHB7 308 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 DNAJC9Q8WXX5 260 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 PGAM5Q96HS1 289 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 MRI1Q9BV20 369 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 SP140LQ9H930 580 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 PAPOLBQ9NRJ5 636 aaKnown RBP11.59□□□□□ -0.55
APOC1-208ENST00000592535 C1orf123Q9NWV4 160 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 TVP23BQ9NYZ1 205 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 IGHV2-70DA0A0C4DH43 119 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.58□□□□□ -0.56
APOC1-208ENST00000592535 A6NLC8 198 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 LGALS8O00214 317 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 PITPNBP48739 271 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 PAX8Q06710 450 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 APOFQ13790 326 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 SNAPC1Q16533 368 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 SFRP4Q6FHJ7 346 aaPredicted RBP11.58□□□□□ -0.56
APOC1-208ENST00000592535 LRRN1Q6UXK5 716 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 NLRC3Q7RTR2 1065 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.58□□□□□ -0.56
APOC1-208ENST00000592535 PLPP7Q8NBV4 271 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 OR52H1Q8NGJ2 320 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 ZFAND2BQ8WV99 257 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 DACT3Q96B18 629 aaPredicted RBP11.58□□□□□ -0.56
APOC1-208ENST00000592535 SUCNR1Q9BXA5 334 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 TEX12Q9BXU0 123 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 OR10A2Q9H208 303 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 PPP1R3EQ9H7J1 279 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 C14orf119Q9NWQ9 140 aa11.58□□□□□ -0.56
APOC1-208ENST00000592535 CCDC182A6NF36 153 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 C3orf80F5H4A9 247 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 MITFO75030 526 aaPredicted RBP11.57□□□□□ -0.56
APOC1-208ENST00000592535 ALOX5APP20292 161 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 CFL1P23528 166 aaKnown RBP11.57□□□□□ -0.56
APOC1-208ENST00000592535 FPR2P25090 351 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 PSMB10P40306 273 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 GSK3AP49840 483 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 RASSF2P50749 326 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 HCCSP53701 268 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 MZT1Q08AG7 82 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 PTGES3Q15185 160 aaKnown RBP11.57□□□□□ -0.56
APOC1-208ENST00000592535 ATP6AP1Q15904 470 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 WDR25Q64LD2 544 aaPredicted RBP11.57□□□□□ -0.56
APOC1-208ENST00000592535 BTNL3Q6UXE8 466 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 ZNF841Q6ZN19 808 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 WDR86Q86TI4 376 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 PARP8Q8N3A8 854 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 GCSAMQ8N6F7 178 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 OR8S1Q8NH09 359 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 RAB40AQ8WXH6 277 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 JMJD8Q96S16 334 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 MMADHCQ9H3L0 296 aaPredicted RBP11.57□□□□□ -0.56
APOC1-208ENST00000592535 ESM1Q9NQ30 184 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 CTSZQ9UBR2 303 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 CLN8Q9UBY8 286 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 ZNF69Q9UC07 566 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 NUP50Q9UKX7 468 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 LRP12Q9Y561 859 aa11.57□□□□□ -0.56
APOC1-208ENST00000592535 hCG_1807616A0A1W2PRN6 198 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 ERICH4A6NGS2 130 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 TRIM77I1YAP6 450 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 PHYHO14832 338 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 PRKYO43930 277 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 MRPL3P09001 348 aaKnown RBP11.56□□□□□ -0.56
APOC1-208ENST00000592535 EGR1P18146 543 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 PSMA6P60900 246 aaKnown RBP11.56□□□□□ -0.56
APOC1-208ENST00000592535 ESRRGP62508 458 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 OR8B8Q15620 311 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 C1orf146Q5VVC0 180 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 KRT77Q7Z794 578 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 C11orf53Q8IXP5 236 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 BCL6BQ8N143 479 aaPredicted RBP11.56□□□□□ -0.56
APOC1-208ENST00000592535 ZDHHC22Q8N966 263 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 LYZL4Q96KX0 146 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 TEAD3Q99594 435 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 PAPOLGQ9BWT3 736 aaKnown RBP11.56□□□□□ -0.56
APOC1-208ENST00000592535 YIPF3Q9GZM5 350 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 RGCCQ9H4X1 137 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 KRT84Q9NSB2 600 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 LAMP5Q9UJQ1 280 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 RHBDD3Q9Y3P4 386 aa11.56□□□□□ -0.56
APOC1-208ENST00000592535 IGHV3OR16-10A0A075B7F0 116 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 KIR2DS1A0A191URI9 304 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 OOEPA6NGQ2 149 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 PRR32B1ATL7 298 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 C22orf46C9J442 243 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 G3V2T6 193 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 M0R129 80 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 PSMD9O00233 223 aa11.55□□□□□ -0.56
APOC1-208ENST00000592535 TNFRSF13BO14836 293 aaPredicted RBP11.55□□□□□ -0.56
APOC1-208ENST00000592535 ADAM20O43506 726 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms