RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 CTSZQ9UBR2 303 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 OR5V1Q9UGF6 321 aa12.21□□□□□ -0.45
FANCA-220ENST00000566409 SOX21Q9Y651 276 aaPredicted RBP12.21□□□□□ -0.45
FANCA-220ENST00000566409 PKD1L1Q8TDX9 2849 aa12.21□□□□□ -0.46
FANCA-220ENST00000566409 IGHV2-70DA0A0C4DH43 119 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 KIR2DS1A0A191URI9 304 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 C3orf80F5H4A9 247 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 PRODHO43272 600 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 LHBP01229 141 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 GRPP07492 148 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 LYNP07948 512 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 IGHV4-38-2P0DP08 117 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 DDOSTP39656 456 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 NAA10P41227 235 aaPredicted RBP12.2□□□□□ -0.46
FANCA-220ENST00000566409 GSK3AP49840 483 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 TIGD6Q17RP2 521 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 WDR25Q64LD2 544 aaPredicted RBP12.2□□□□□ -0.46
FANCA-220ENST00000566409 GCSAMQ8N6F7 178 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 BOLLQ8N9W6 283 aaKnown RBP12.2□□□□□ -0.46
FANCA-220ENST00000566409 OR8B3Q8NGG8 313 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 OR52H1Q8NGJ2 320 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 NRBF2Q96F24 287 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 ZNF48Q96MX3 618 aaPredicted RBP12.2□□□□□ -0.46
FANCA-220ENST00000566409 OR8B2Q96RD0 313 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 OPA3Q9H6K4 179 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 YY1AP1Q9H869 796 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 C1orf123Q9NWV4 160 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 NUP50Q9UKX7 468 aa12.2□□□□□ -0.46
FANCA-220ENST00000566409 NOP16Q9Y3C1 178 aaKnown RBP12.2□□□□□ -0.46
FANCA-220ENST00000566409 C22orf46C9J442 243 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 LGALS8O00214 317 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 H2BFMP0C1H6 154 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 EGR1P18146 543 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 ALOX5APP20292 161 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 FPR2P25090 351 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 ACKR3P25106 362 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 CRISP1P54107 249 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 GFOD2Q3B7J2 385 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 ARMCX4Q5H9R4 360 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 SLC35D3Q5M8T2 416 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 LRRN1Q6UXK5 716 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 SIGLECL1Q8N7X8 197 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 ZNF454Q8N9F8 522 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 SPERTQ8NA61 448 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 THEM6Q8WUY1 208 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 PLEKHA8Q96JA3 519 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 LYZL4Q96KX0 146 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 C1orf147Q96MC9 270 aaPredicted RBP12.19□□□□□ -0.46
FANCA-220ENST00000566409 MRI1Q9BV20 369 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 SMURF1Q9HCE7 757 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 CLN8Q9UBY8 286 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 RHBDD3Q9Y3P4 386 aa12.19□□□□□ -0.46
FANCA-220ENST00000566409 IGHV3OR16-10A0A075B7F0 116 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 CCDC182A6NF36 153 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 ANKRD30BLA7E2S9 258 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 PRR32B1ATL7 298 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 TRIM77I1YAP6 450 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 PHYHO14832 338 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 MITFO75030 526 aaPredicted RBP12.18□□□□□ -0.46
FANCA-220ENST00000566409 APOC1P02654 83 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 PPIAL4GP0DN37 164 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 EPHA2P29317 976 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 ELF3P78545 371 aaPredicted RBP12.18□□□□□ -0.46
FANCA-220ENST00000566409 EFNB1P98172 346 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 POU4F2Q12837 409 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 APOFQ13790 326 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 PTGES3Q15185 160 aaKnown RBP12.18□□□□□ -0.46
FANCA-220ENST00000566409 OR8B8Q15620 311 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 SNAPC1Q16533 368 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 DOK3Q7L591 496 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 NLRC3Q7RTR2 1065 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 FAM90A1Q86YD7 464 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 PARP8Q8N3A8 854 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 UPRTQ96BW1 309 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 PGAM5Q96HS1 289 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 JMJD8Q96S16 334 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 TEAD3Q99594 435 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 NUDT16L1Q9BRJ7 211 aaKnown RBP12.18□□□□□ -0.46
FANCA-220ENST00000566409 FGF23Q9GZV9 251 aaPredicted RBP12.18□□□□□ -0.46
FANCA-220ENST00000566409 OR10A2Q9H208 303 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 RASSF4Q9H2L5 321 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 SP140LQ9H930 580 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 PAPOLBQ9NRJ5 636 aaKnown RBP12.18□□□□□ -0.46
FANCA-220ENST00000566409 TVP23BQ9NYZ1 205 aa12.18□□□□□ -0.46
FANCA-220ENST00000566409 TMEM89A2RUT3 159 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 OOEPA6NGQ2 149 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 A6NLC8 198 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.17□□□□□ -0.46
FANCA-220ENST00000566409 PRKYO43930 277 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 COMPP49747 757 aaPredicted RBP12.17□□□□□ -0.46
FANCA-220ENST00000566409 UBA52P62987 128 aaKnown RBP12.17□□□□□ -0.46
FANCA-220ENST00000566409 CSNK2BP67870 215 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 BTNL3Q6UXE8 466 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 BCDIN3DQ7Z5W3 292 aaKnown RBP12.17□□□□□ -0.46
FANCA-220ENST00000566409 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.17□□□□□ -0.46
FANCA-220ENST00000566409 OR1M1Q8NGA1 313 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 OR8B12Q8NGG6 310 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 OR8S1Q8NH09 359 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 OR5K1Q8NHB7 308 aa12.17□□□□□ -0.46
FANCA-220ENST00000566409 ITPKCQ96DU7 683 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms