RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	CLPX	O76031	633 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	HIST1H2AB	P04908	130 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	SFTPB	P07988	381 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	MELTF	P08582	738 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	TSPAN19	P0C672	248 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	RPS2	P15880	293 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	FUT1	P19526	365 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	KITLG	P21583	273 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	AQP2	P41181	271 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	FAM3B	P58499	235 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	FGF12	P61328	243 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	CD47	Q08722	323 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	ENDOG	Q14249	297 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	TAF11	Q15544	211 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	BAK1	Q16611	211 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	KRT71	Q3SY84	523 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	TNFAIP8L3	Q5GJ75	292 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	SLC27A4	Q6P1M0	643 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	SLC25A47	Q6Q0C1	308 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	UNQ6126/PRO20091	Q6UXV3	157 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	ZNF841	Q6ZN19	808 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	HIST3H2A	Q7L7L0	130 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	NANOGNB	Q7Z5D8	188 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	ZER1	Q7Z7L7	766 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	PTOV1	Q86YD1	416 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	ANKRD13B	Q86YJ7	626 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	NKAIN4	Q8IVV8	208 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	C1orf174	Q8IYL3	243 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	OR5AS1	Q8N127	324 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	MUC20	Q8N307	709 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	C19orf18	Q8NEA5	215 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	OR10AD1	Q8NGE0	317 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	MOSPD2	Q8NHP6	518 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	PFN4	Q8NHR9	129 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	AEN	Q8WTP8	325 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	C10orf82	Q8WW14	230 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	NPIPB3	Q92617	1050 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	HIST1H2AC	Q93077	130 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	CMBL	Q96DG6	245 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	THOC1	Q96FV9	657 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	CHCHD6	Q9BRQ6	235 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	ELOVL3	Q9HB03	270 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	INIP	Q9NRY2	104 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	MAN2C1	Q9NTJ4	1040 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	C20orf141	Q9NUB4	165 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	THAP1	Q9NVV9	213 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	CCDC167	Q9P0B6	97 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	AASS	Q9UDR5	926 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	BAG5	Q9UL15	447 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	ANGPT4	Q9Y264	503 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	STARD10	Q9Y365	291 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	GMEB1	Q9Y692	573 aa		4.26	□□□□□ -1.73
TCF4-223	ENST00000564343	CENPVL3	A0A0U1RRI6	287 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	TNFRSF13B	O14836	293 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	MLNR	O43193	412 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	GPR137B	O60478	399 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	OR7A10	O76100	309 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	IGHV4-59	P01825	116 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	MT-ND1	P03886	318 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	CST2	P09228	141 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	CSF1	P09603	554 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	MMP9	P14780	707 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	TNFRSF1B	P20333	461 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	GSTM3	P21266	225 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	PMEL	P40967	661 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	PITPNB	P48739	271 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	DAP3	P51398	398 aa	Known RBP	4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	ARHGDIA	P52565	204 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	CRYBA2	P53672	197 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	BPIFB3	P59826	476 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	CFHR3	Q02985	330 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	SELPLG	Q14242	412 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	ZNF404	Q494X3	552 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	GPR157	Q5UAW9	335 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	OTP	Q5XKR4	325 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	FAM205BP	Q63HN1	556 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	WDR25	Q64LD2	544 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	C1orf94	Q6P1W5	598 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	DLEU7	Q6UYE1	221 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	ZNF620	Q6ZNG0	422 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343		Q6ZSV7	163 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	FOXL2NB	Q6ZUU3	175 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	IGFN1	Q86VF2	1251 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	TMEM86B	Q8N661	226 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	MPLKIP	Q8TAP9	179 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	TMEM255B	Q8WV15	326 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	SLC7A6	Q92536	515 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	DYRK2	Q92630	601 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	HAVCR1	Q96D42	359 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	SPDL1	Q96EA4	605 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	RNF125	Q96EQ8	232 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	PLEKHA8	Q96JA3	519 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	TBX15	Q96SF7	602 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	SLC30A2	Q9BRI3	323 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	PCGF1	Q9BSM1	259 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	TXNIP	Q9H3M7	391 aa		4.25	□□□□□ -1.73
TCF4-223	ENST00000564343	CENPH	Q9H3R5	247 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms