RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 DUS3LQ96G46 650 aaKnown RBP12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 PITPNC1Q9UKF7 332 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 LOC107986453A0A1B0GWG9 222 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 IZUMO4Q1ZYL8 232 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 NTNG2Q96CW9 530 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 ONECUT2O95948 504 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 CTSLP07711 333 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 METAP1P53582 386 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 COX19Q49B96 90 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 PARS2Q7L3T8 475 aaKnown RBP12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 THYN1Q9P016 225 aa12.59□□□□□ -0.39
CSPG4P12-202ENST00000559989 GUSBP08236 651 aa12.58□□□□□ -0.39
CSPG4P12-202ENST00000559989 MYBPHQ13203 477 aa12.58□□□□□ -0.39
CSPG4P12-202ENST00000559989 TCTN1Q2MV58 587 aa12.58□□□□□ -0.39
CSPG4P12-202ENST00000559989 HLA-DRB5Q30154 266 aa12.58□□□□□ -0.39
CSPG4P12-202ENST00000559989 OR5R1Q8NH85 324 aa12.58□□□□□ -0.39
CSPG4P12-202ENST00000559989 ZNF764Q96H86 408 aaPredicted RBP12.58□□□□□ -0.39
CSPG4P12-202ENST00000559989 GPR87Q9BY21 358 aa12.58□□□□□ -0.39
CSPG4P12-202ENST00000559989 MAGT1Q9H0U3 335 aa12.58□□□□□ -0.39
CSPG4P12-202ENST00000559989 MYO9BQ13459 2157 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 HOXC11O43248 304 aaPredicted RBP12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 NAT1P18440 290 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 C19orf57Q0VDD7 668 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF519Q8TB69 540 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 USP3Q9Y6I4 520 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF638Q14966 1978 aaKnown RBP12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 PARP4Q9UKK3 1724 aaKnown RBP12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 JOSD1Q15040 202 aaPredicted RBP12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 CST9Q5W186 159 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 ERASQ7Z444 233 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR5M11Q96RB7 305 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 ELOVL1Q9BW60 279 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 LHX3Q9UBR4 397 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 TCF21O43680 179 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 CA2P00918 260 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 ARRB2P32121 409 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 FCRL6Q6DN72 434 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 D2HGDHQ8N465 521 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 FBXO27Q8NI29 283 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF426Q9BUY5 554 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 Q9N2K0 584 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 IL23AQ9NPF7 189 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 UQCC1Q9NVA1 299 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 A0A1W2PN81 502 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 FABP2P12104 132 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 CHRNA7P36544 502 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 IGSF11Q5DX21 431 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 C11orf87Q6NUJ2 197 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR52N4Q8NGI2 321 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR1L6Q8NGR2 347 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 ISL2Q96A47 359 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 SLAMF6Q96DU3 332 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 PROCRQ9UNN8 238 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 OPN1MWP04001 364 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 SEMG1P04279 462 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 FURINP09958 794 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 OPN1MW2P0DN77 364 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 OPN1MW3P0DN78 364 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 JUNBP17275 347 aaPredicted RBP12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 MEOX2P50222 304 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 Q6ZNX1 250 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF788Q6ZQV5 615 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 PDPNQ86YL7 162 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR51E1Q8TCB6 317 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF778Q96MU6 729 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 MOB4Q9Y3A3 225 aa12.58□□□□□ -0.4
CSPG4P12-202ENST00000559989 SDCBPO00560 298 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 UBE2MP61081 183 aaKnown RBP12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 HSD11B1LQ7Z5J1 315 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 TMEM229BQ8NBD8 167 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 HDAC8Q9BY41 377 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 MGPP08493 103 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 HOXC13P31276 330 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 PRDX1Q06830 199 aaKnown RBP12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 MED1Q15648 1581 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 ADAT3Q96EY9 351 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 SH2D2AQ9NP31 389 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 CYB5R1Q9UHQ9 305 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 NTNG1Q9Y2I2 539 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 MFNGO00587 321 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 AKR7A3O95154 331 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 CAMPP49913 170 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 YPEL5P62699 121 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 C19orf54Q5BKX5 351 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 PLPP6Q8IY26 295 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 OSR2Q8N2R0 312 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR5AU1Q8NGC0 362 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 EID2BQ96D98 161 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 TMEM38AQ9H6F2 299 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 FBXO4Q9UKT5 387 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 TMEM129A0AVI4 362 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 CXCL12P48061 93 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 MARCH3Q86UD3 253 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR8A1Q8NGG7 326 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 C1QTNF3Q9BXJ4 246 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 EIF4E2O60573 245 aaKnown RBP12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 TMEM127O75204 238 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 SNRPEP62304 92 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms