RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 ATP5HO75947 161 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 VENTXO95231 258 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 CYB5R3P00387 301 aaPredicted RBP8.46□□□□□ -1.06
USP3-207ENST00000558218 GYPBP06028 91 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 LIPFP07098 398 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 PRR23D2P0DMB1 279 aaPredicted RBP8.46□□□□□ -1.06
USP3-207ENST00000558218 CLUP10909 449 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 RPS2P15880 293 aaKnown RBP8.46□□□□□ -1.06
USP3-207ENST00000558218 CA6P23280 308 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 HSD11B1P28845 292 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 PSMB10P40306 273 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 RPS27P42677 84 aaKnown RBP8.46□□□□□ -1.06
USP3-207ENST00000558218 PRKXP51817 358 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 BPIFB3P59826 476 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 GNB2P62879 340 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 CBX1P83916 185 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 PAX2Q02962 417 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 DBPQ10586 325 aaPredicted RBP8.46□□□□□ -1.06
USP3-207ENST00000558218 EIF2B1Q14232 305 aaKnown RBP8.46□□□□□ -1.06
USP3-207ENST00000558218 GLYATL3Q5SZD4 288 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 DEGS2Q6QHC5 323 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 BTNL3Q6UXE8 466 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 DPY19L4Q7Z388 723 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 TMEM179BQ7Z7N9 219 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 SPATA24Q86W54 205 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.46□□□□□ -1.06
USP3-207ENST00000558218 TIGD4Q8IY51 512 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 FTMTQ8N4E7 242 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 BPIFB2Q8N4F0 458 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 CSNK2A3Q8NEV1 391 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 OR8B3Q8NGG8 313 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 ZNF420Q8TAQ5 688 aaPredicted RBP8.46□□□□□ -1.06
USP3-207ENST00000558218 DVL3Q92997 716 aaPredicted RBP8.46□□□□□ -1.06
USP3-207ENST00000558218 SGK3Q96BR1 496 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 OR8B2Q96RD0 313 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 TMEM246Q9BRR3 403 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 SLC25A19Q9HC21 320 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 RNF7Q9UBF6 113 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 NUP50Q9UKX7 468 aa8.46□□□□□ -1.06
USP3-207ENST00000558218 TRAV38-1A0A0B4J264 116 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 ACOD1A6NK06 481 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 FAM183AA6NL82 134 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 PHYHO14832 338 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 LHBP01229 141 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 POU1F1P28069 291 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 CFHR2P36980 270 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 OPRL1P41146 370 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 CX3CR1P49238 355 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 COMPP49747 757 aaPredicted RBP8.45□□□□□ -1.06
USP3-207ENST00000558218 FAM3AP98173 230 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 BNIP1Q12981 228 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 CD276Q5ZPR3 534 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 RBMS3Q6XE24 437 aaKnown RBP8.45□□□□□ -1.06
USP3-207ENST00000558218 PRSS45Q7RTY3 260 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 ERI1Q8IV48 349 aaKnown RBP8.45□□□□□ -1.06
USP3-207ENST00000558218 PARP8Q8N3A8 854 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 OR6N2Q8NGY6 317 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 OTOSQ8NHW6 89 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 DACT3Q96B18 629 aaPredicted RBP8.45□□□□□ -1.06
USP3-207ENST00000558218 DMRTB1Q96MA1 342 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 OR10A2Q9H208 303 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 OR51V1Q9H2C8 321 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 ZMAT3Q9HA38 289 aaKnown RBP8.45□□□□□ -1.06
USP3-207ENST00000558218 RNPEPL1Q9HAU8 725 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 ABCB9Q9NP78 766 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 CLN8Q9UBY8 286 aa8.45□□□□□ -1.06
USP3-207ENST00000558218 TMEM89A2RUT3 159 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 F8W735 103 aaPredicted RBP8.44□□□□□ -1.06
USP3-207ENST00000558218 LGALS8O00214 317 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 TNFRSF13BO14836 293 aaPredicted RBP8.44□□□□□ -1.06
USP3-207ENST00000558218 FAM20BO75063 409 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 ANXA2P07355 339 aaKnown RBP8.44□□□□□ -1.06
USP3-207ENST00000558218 LYNP07948 512 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 H2BFMP0C1H6 154 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 PSKH1P11801 424 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 ALOX5APP20292 161 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 PRKACGP22612 351 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 DCTDP32321 178 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 CD80P33681 288 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 PITPNBP48739 271 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 CRISP1P54107 249 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 SEC61A1P61619 476 aaKnown RBP8.44□□□□□ -1.06
USP3-207ENST00000558218 ESRRGP62508 458 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 MPPED2Q15777 294 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 TIGD6Q17RP2 521 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 ARMCX4Q5H9R4 360 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 PLBD1Q6P4A8 553 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 FAHD1Q6P587 224 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 ZNF841Q6ZN19 808 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 C9orf139Q6ZV77 190 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 DOK3Q7L591 496 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 KRT74Q7RTS7 529 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 SLC16A9Q7RTY1 509 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 CPOQ8IVL8 374 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 IQCF1Q8N6M8 205 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 OR56B2PQ8NGI1 322 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 OR2AE1Q8NHA4 323 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 UTP4Q969X6 686 aaKnown RBP8.44□□□□□ -1.06
USP3-207ENST00000558218 OTULINQ96BN8 352 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 UPRTQ96BW1 309 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms