RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 AWAT2Q6E213 333 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 DRAM2Q6UX65 266 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 ABHD12BQ7Z5M8 362 aaPredicted RBP8.69□□□□□ -1.02
SS18-205ENST00000542420 NAA40Q86UY6 237 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 FAM89BQ8N5H3 189 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 DEFB123Q8N688 67 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 STEAP2Q8NFT2 490 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 LINC00052Q96N35 136 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 IP6K3Q96PC2 410 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 ZNF416Q9BWM5 594 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 CST11Q9H112 138 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 TMEM185BQ9H7F4 350 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 UBQLN2Q9UHD9 624 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 OPN4Q9UHM6 478 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 KLK13Q9UKR3 277 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 MRPS28Q9Y2Q9 187 aaKnown RBP8.69□□□□□ -1.02
SS18-205ENST00000542420 A0A0J9YW62 118 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 LOC101059948A0A1B0GTJ6 334 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 IL2RAP01589 272 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 CELA2AP08217 269 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 BTF3P20290 206 aaKnown RBP8.69□□□□□ -1.02
SS18-205ENST00000542420 AGTR1P30556 359 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 TSPAN5P62079 268 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 SCRN3Q0VDG4 424 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 TUSC1Q2TAM9 212 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 RNASE10Q5GAN6 216 aaKnown RBP8.69□□□□□ -1.02
SS18-205ENST00000542420 CDCP2Q5VXM1 449 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 OTPQ5XKR4 325 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 SLC16A14Q7RTX9 510 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 SLC25A42Q86VD7 318 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 NAXDQ8IW45 347 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 FTMTQ8N4E7 242 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 BPIFB2Q8N4F0 458 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 ARRDC1Q8N5I2 433 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 OR5M1Q8NGP8 315 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 OR13C9Q8NGT0 318 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 PCNPQ8WW12 178 aaKnown RBP8.69□□□□□ -1.02
SS18-205ENST00000542420 PGAM5Q96HS1 289 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 ADGRG7Q96K78 797 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 C1orf147Q96MC9 270 aaPredicted RBP8.69□□□□□ -1.02
SS18-205ENST00000542420 SCGB3A2Q96PL1 93 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 TM2D1Q9BX74 207 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 LPAR5Q9H1C0 372 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 RGCCQ9H4X1 137 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 LDAHQ9H6V9 325 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 MAB21L2Q9Y586 359 aa8.69□□□□□ -1.02
SS18-205ENST00000542420 KMT2EQ8IZD2 1858 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 OR14I1A6ND48 311 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 SMAD9O15198 467 aaKnown RBP8.68□□□□□ -1.02
SS18-205ENST00000542420 RER1O15258 196 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 RAMP1O60894 148 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 TSC22D2O75157 780 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 MPC2O95563 127 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 WDPCPO95876 746 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 CD8AP01732 235 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 AMY2AP04746 511 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 RLN1P04808 185 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 OR4E1P0C645 316 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 CNR1P21554 472 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 CALCRP30988 508 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 MPLP40238 635 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 CASRP41180 1078 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 EIF1AXP47813 144 aaKnown RBP8.68□□□□□ -1.02
SS18-205ENST00000542420 ZNF81P51508 661 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 PCBD1P61457 104 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 EXOSC2Q13868 293 aaKnown RBP8.68□□□□□ -1.02
SS18-205ENST00000542420 CDNFQ49AH0 187 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 FJX1Q86VR8 437 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 ANGPTL5Q86XS5 388 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 ZNF100Q8IYN0 542 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 C12orf45Q8N5I9 185 aaPredicted RBP8.68□□□□□ -1.02
SS18-205ENST00000542420 ZIC4Q8N9L1 334 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 OR2I1PQ8NGU4 316 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 CT55Q8WUE5 264 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 TECTBQ96PL2 329 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 OCSTAMPQ9BR26 566 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 ULBP2Q9BZM5 246 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 CHST5Q9GZS9 411 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 OR10A2Q9H208 303 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 PRDM6Q9NQX0 595 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 MED9Q9NWA0 146 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 KIF25Q9UIL4 384 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 BOKQ9UMX3 212 aaPredicted RBP8.68□□□□□ -1.02
SS18-205ENST00000542420 XIRP2A4UGR9 3374 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 A0A0B4J2A0 478 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 LMX1BO60663 402 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 CDC14BO60729 498 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 RPA2P15927 270 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 CRYGSP22914 178 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 NFYAP23511 347 aaPredicted RBP8.68□□□□□ -1.02
SS18-205ENST00000542420 CDAP32320 146 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 CD96P40200 585 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 SGCAQ16586 387 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 GFOD2Q3B7J2 385 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 CARD17Q5XLA6 110 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 FAAP20Q6NZ36 180 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 FIP1L1Q6UN15 594 aaKnown RBP8.68□□□□□ -1.02
SS18-205ENST00000542420 TRAPPC6BQ86SZ2 158 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 GGNQ86UU5 652 aa8.68□□□□□ -1.02
SS18-205ENST00000542420 MUC20Q8N307 709 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms