RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 XRCC2O43543 280 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 DNAJC8O75937 253 aaPredicted RBP8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 LHBP01229 141 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 ANXA2P07355 339 aaKnown RBP8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 PRR23D2P0DMB1 279 aaPredicted RBP8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 IRF2P14316 349 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 FPR2P25090 351 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 CFPP27918 469 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 SLC15A1P46059 708 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 COMPP49747 757 aaPredicted RBP8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 GSK3AP49840 483 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 POU4F2Q12837 409 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 DNAL1Q4LDG9 190 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 ARMCX4Q5H9R4 360 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 LRRN1Q6UXK5 716 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 C12orf54Q6X4T0 127 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 DOK3Q7L591 496 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 SHFQ7M4L6 423 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 GCSAMQ8N6F7 178 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 PLPP7Q8NBV4 271 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 OR8B3Q8NGG8 313 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 OTOSQ8NHW6 89 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 UTP4Q969X6 686 aaKnown RBP8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 UPRTQ96BW1 309 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 LYZL4Q96KX0 146 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 DUX5Q96PT3 197 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 OR8B2Q96RD0 313 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 NUDT16L1Q9BRJ7 211 aaKnown RBP8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 FGF23Q9GZV9 251 aaPredicted RBP8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 TOR3AQ9H497 397 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 SLC25A19Q9HC21 320 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 BRD7Q9NPI1 651 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 RHBDD3Q9Y3P4 386 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 IGHV3OR15-7A0A075B7D8 119 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 CCDC182A6NF36 153 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 HAX1O00165 279 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 MITFO75030 526 aaPredicted RBP8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 E2F6O75461 281 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 TIPRLO75663 272 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 PLATP00750 562 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 HMGN1P05114 100 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 H2BFMP0C1H6 154 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 PPIAL4GP0DN37 164 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 ANXA8P13928 327 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 ACKR3P25106 362 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 HSD11B1P28845 292 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 DDOSTP39656 456 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 NAA10P41227 235 aaPredicted RBP8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 DAPP51397 102 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 ACTG1P63261 375 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 CSNK2BP67870 215 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 BNIP1Q12981 228 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 FAHD1Q6P587 224 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 BTNL3Q6UXE8 466 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 RHOUQ7L0Q8 258 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 FGFRL1Q8N441 504 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 SPERTQ8NA61 448 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 THEM6Q8WUY1 208 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 TAF15Q92804 592 aaKnown RBP eCLIP8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 GCDHQ92947 438 aaPredicted RBP8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 SEH1LQ96EE3 360 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 PLEKHA8Q96JA3 519 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 JMJD8Q96S16 334 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 OPA3Q9H6K4 179 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 SMURF1Q9HCE7 757 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 TVP23BQ9NYZ1 205 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 CLN8Q9UBY8 286 aa8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 NOP16Q9Y3C1 178 aaKnown RBP8.67□□□□□ -1.02
PRPF40B-204ENST00000527253 MDFIC2A0A1B0GVS7 189 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 A0A1B0GW55 424 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 OOEPA6NGQ2 149 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 DNAJC9-AS1A6NH13 148 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 ANKRD30BLA7E2S9 258 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 PHYHO14832 338 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 PRODHO43272 600 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 GYPAP02724 150 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 LYNP07948 512 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 DUX4L2P0CJ85 424 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 DUX4L3P0CJ86 424 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 DUX4L4P0CJ87 422 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 DUX4L5P0CJ88 424 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 DUX4L6P0CJ89 424 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 DUX4L7P0CJ90 424 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 HOXB6P17509 224 aaKnown RBP8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 AMY2BP19961 511 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 ALOX5APP20292 161 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 PAICSP22234 425 aaKnown RBP8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 CRISP1P54107 249 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 FGF12P61328 243 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 OR8B8Q15620 311 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 TIGD6Q17RP2 521 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 GFOD2Q3B7J2 385 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 SLC35D3Q5M8T2 416 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 TEX36Q5VZQ5 186 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 DUX4L9Q6RFH8 374 aaPredicted RBP8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 C9orf139Q6ZV77 190 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 NLRC3Q7RTR2 1065 aa8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 BCDIN3DQ7Z5W3 292 aaKnown RBP8.66□□□□□ -1.02
PRPF40B-204ENST00000527253 FAM90A1Q86YD7 464 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms