RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SPSB4Q96A44 273 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 ZMYND19Q96E35 227 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-215ENST00000515516 REEP6Q96HR9 211 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 PGAM5Q96HS1 289 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 ABHD6Q9BV23 337 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 ESM1Q9NQ30 184 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 DNAJC27Q9NZQ0 273 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 KIF17Q9P2E2 1029 aa11.41□□□□□ -0.58
TCOF1-215ENST00000515516 IGHV3OR16-10A0A075B7F0 116 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 C5orf63A6NC05 138 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 OOEPA6NGQ2 149 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 ADAM20O43506 726 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 PTBP3O95758 552 aaKnown RBP11.4□□□□□ -0.58
TCOF1-215ENST00000515516 LYNP07948 512 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 ANXA8P13928 327 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 ZNF121P58317 390 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-215ENST00000515516 PAX2Q02962 417 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 FLOT2Q14254 428 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 GFOD2Q3B7J2 385 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 KLHL12Q53G59 568 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 PLBD1Q6P4A8 553 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 RHOUQ7L0Q8 258 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 SLC16A9Q7RTY1 509 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 BCL6BQ8N143 479 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-215ENST00000515516 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 CSNK2A3Q8NEV1 391 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 BCAS4Q8TDM0 211 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 THEM6Q8WUY1 208 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 SLC25A28Q96A46 364 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 SGK3Q96BR1 496 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 UPRTQ96BW1 309 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 RGCCQ9H4X1 137 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 BRD7Q9NPI1 651 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 DYSFO75923 2080 aa11.4□□□□□ -0.58
TCOF1-215ENST00000515516 ANK2Q01484 3957 aa11.4□□□□□ -0.59
TCOF1-215ENST00000515516 LIPFP07098 398 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 IGHV4-38-2P0DP08 117 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 PRTN3P24158 256 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 PSMB10P40306 273 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 OPRL1P41146 370 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 FGF12P61328 243 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 RPS7P62081 194 aaKnown RBP11.39□□□□□ -0.59
TCOF1-215ENST00000515516 CBX1P83916 185 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 FAM3AP98173 230 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 FOXL1Q12952 345 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 TMEM179BQ7Z7N9 219 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 TIGD4Q8IY51 512 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 MICU1Q9BPX6 476 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 MARCH7Q9H992 704 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 DNAJB9Q9UBS3 223 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 TANC2Q9HCD6 1990 aa11.39□□□□□ -0.59
TCOF1-215ENST00000515516 TRAV40A0A0B4J280 105 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 DNAJC9-AS1A6NH13 148 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 ANXA2P2A6NMY6 339 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 PRODHO43272 600 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 FKBP6O75344 327 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 TIPRLO75663 272 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 GYPAP02724 150 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 PRKACGP22612 351 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 ANOS1P23352 680 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 NAA10P41227 235 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-215ENST00000515516 GSK3AP49840 483 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 IL5RAQ01344 420 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 SLC35D3Q5M8T2 416 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 GPR157Q5UAW9 335 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 ZNF841Q6ZN19 808 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 ZNF826PQ6ZT77 177 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 CPOQ8IVL8 374 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 PNLDC1Q8NA58 520 aaKnown RBP11.38□□□□□ -0.59
TCOF1-215ENST00000515516 OTOSQ8NHW6 89 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 ZDHHC16Q969W1 377 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 DUX5Q96PT3 197 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 PAPOLGQ9BWT3 736 aaKnown RBP11.38□□□□□ -0.59
TCOF1-215ENST00000515516 NIPAL2Q9H841 368 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 ABCB9Q9NP78 766 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 LAMP5Q9UJQ1 280 aa11.38□□□□□ -0.59
TCOF1-215ENST00000515516 hCG_38984A0A1B0GV85 526 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 SELENOFO60613 162 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 DNAJC8O75937 253 aaPredicted RBP11.37□□□□□ -0.59
TCOF1-215ENST00000515516 HKR1P10072 659 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 BPIFB3P59826 476 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 CDK5Q00535 292 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 SNAPC1Q16533 368 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 MICBQ29980 383 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 AWAT1Q58HT5 328 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 C9orf139Q6ZV77 190 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 KRT77Q7Z794 578 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 OR1M1Q8NGA1 313 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 LRRC29Q8WV35 223 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 DNAJC9Q8WXX5 260 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 HIST1H2AAQ96QV6 131 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 AMELYQ99218 206 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 PCGF1Q9BSM1 259 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 RNPEPL1Q9HAU8 725 aa11.37□□□□□ -0.59
TCOF1-215ENST00000515516 ZNF879B4DU55 563 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 C22orf46C9J442 243 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 P2RY10O00398 339 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 TMPRSS2O15393 492 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 TOX4O94842 621 aa11.36□□□□□ -0.59
TCOF1-215ENST00000515516 ECDO95905 644 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms