RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 GPX7Q96SL4 187 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-211ENST00000508546 SSX3Q99909 188 aa7.66□□□□□ -1.18
NEDD9-211ENST00000508546 ATF6BQ99941 703 aa7.66□□□□□ -1.18
NEDD9-211ENST00000508546 DCTN5Q9BTE1 182 aa7.66□□□□□ -1.18
NEDD9-211ENST00000508546 THTPAQ9BU02 230 aa7.66□□□□□ -1.18
NEDD9-211ENST00000508546 NUAK2Q9H093 628 aa7.66□□□□□ -1.18
NEDD9-211ENST00000508546 FAM234AQ9H0X4 552 aa7.66□□□□□ -1.18
NEDD9-211ENST00000508546 MMP28Q9H239 520 aa7.66□□□□□ -1.18
NEDD9-211ENST00000508546 RNPEPL1Q9HAU8 725 aa7.66□□□□□ -1.18
NEDD9-211ENST00000508546 NRIP3Q9NQ35 241 aa7.66□□□□□ -1.18
NEDD9-211ENST00000508546 C1orf123Q9NWV4 160 aa7.66□□□□□ -1.18
NEDD9-211ENST00000508546 MRPL15Q9P015 296 aaKnown RBP7.66□□□□□ -1.18
NEDD9-211ENST00000508546 IGHV3OR15-7A0A075B7D8 119 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 A0A087WUU8 490 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 A0A1B0GW55 424 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 A0A1W2PRD5 423 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 A0A1W2PRF3 423 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 A0A1W2PRM7 423 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 hCG_1807616A0A1W2PRN6 198 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 A6NLC8 198 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 ADARB2-AS1A8MUL3 147 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 K7EIL1 84 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 IMPA2O14732 288 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 PTP4A3O75365 173 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 NDUFB2O95178 105 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 PPP1R3DO95685 299 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 GRPP07492 148 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 DUX4L2P0CJ85 424 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 DUX4L3P0CJ86 424 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 DUX4L4P0CJ87 422 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 DUX4L5P0CJ88 424 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 DUX4L6P0CJ89 424 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 DUX4L7P0CJ90 424 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 VSIG10L2P0DP72 767 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 CRABP1P29762 137 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 GPR4P46093 362 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 DLX1P56177 255 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 SELENOWP63302 87 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 POU4F2Q12837 409 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 TRAP1Q12931 704 aaKnown RBP7.65□□□□□ -1.18
NEDD9-211ENST00000508546 MEP1BQ16820 701 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 PCK2Q16822 640 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 CYBRD1Q53TN4 286 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 WDR38Q5JTN6 314 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 SLC18B1Q6NT16 456 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 DNM1P34Q6PK57 102 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 DUX4L9Q6RFH8 374 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-211ENST00000508546 CFAP77Q6ZQR2 320 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 LIAT1Q6ZQX7 453 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 PTCHD4Q6ZW05 846 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 MBOAT2Q6ZWT7 520 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 TSEN54Q7Z6J9 526 aaKnown RBP7.65□□□□□ -1.18
NEDD9-211ENST00000508546 PNKDQ8N490 385 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 WFDC9Q8NEX5 89 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 SLC26A10Q8NG04 563 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 SLC7A13Q8TCU3 470 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 CLPTM1LQ96KA5 538 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 CCL13Q99616 98 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 PITX2Q99697 317 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 SH3GL1Q99961 368 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 FNDC11Q9BVV2 318 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 NPFFR1Q9GZQ6 430 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 MEGF9Q9H1U4 602 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 METTL8Q9H825 291 aaKnown RBP7.65□□□□□ -1.18
NEDD9-211ENST00000508546 PNRC2Q9NPJ4 139 aaKnown RBP7.65□□□□□ -1.18
NEDD9-211ENST00000508546 C14orf119Q9NWQ9 140 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 DUX4Q9UBX2 424 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 TMEM5Q9Y2B1 443 aa7.65□□□□□ -1.18
NEDD9-211ENST00000508546 LYSTQ99698 3801 aa7.65□□□□□ -1.19
NEDD9-211ENST00000508546 IGLV1-36A0A0B4J1U3 117 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-211ENST00000508546 MEGF11A6BM72 1044 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 GGT3PA6NGU5 568 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-211ENST00000508546 M0R135 149 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 M0R1W7 72 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 DCTN6O00399 190 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 BHLHE40O14503 412 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 SOCS2O14508 198 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 FFAR1O14842 300 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 NDUFB3O43676 98 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 TXNDC12O95881 172 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 KDELR2P33947 212 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 GRK5P34947 590 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 GGT2P36268 569 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 CDKN2AP42771 156 aaKnown RBP7.64□□□□□ -1.19
NEDD9-211ENST00000508546 TGM4P49221 684 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 TPTEP56180 551 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 PSME3P61289 254 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 ZNF92Q03936 586 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 PRB3Q04118 309 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-211ENST00000508546 LY6EQ16553 131 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 LRRC75BQ2VPJ9 315 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 LRRC23Q53EV4 343 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-211ENST00000508546 LRRC10Q5BKY1 277 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 RABL3Q5HYI8 236 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 ATPAF1Q5TC12 328 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-211ENST00000508546 C1orf146Q5VVC0 180 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 PGBD2Q6P3X8 592 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 ZNF730Q6ZMV8 503 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms