RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ZNF879B4DU55 563 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 HOXA3O43365 443 aaPredicted RBP10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 TBX1O43435 398 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 ADAM20O43506 726 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 LHBP01229 141 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 GYPAP02724 150 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 ANXA2P07355 339 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 GRPP07492 148 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 DDOSTP39656 456 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 SLC15A1P46059 708 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 BLVRAP53004 296 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 IL13RA1P78552 427 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 FAM3AP98173 230 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 EIF2B1Q14232 305 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 KLHL12Q53G59 568 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 GPR157Q5UAW9 335 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 TEX36Q5VZQ5 186 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 CD276Q5ZPR3 534 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 RUSC1-AS1Q66K80 236 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 ERI1Q8IV48 349 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 OR6N2Q8NGY6 317 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 TEX47Q8TBZ9 253 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 CCDC124Q96CT7 223 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 ASB9Q96DX5 294 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 REEP6Q96HR9 211 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 NSL1Q96IY1 281 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 TBX15Q96SF7 602 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 INTS14Q96SY0 518 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 FEVQ99581 238 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 PCGF1Q9BSM1 259 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 ABHD6Q9BV23 337 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 TOR3AQ9H497 397 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 MARCH7Q9H992 704 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 C14orf119Q9NWQ9 140 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 CMYA5Q8N3K9 4069 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 VWFP04275 2813 aa10.78□□□□□ -0.68
HMGCS1-205ENST00000508319 ARRDC5A6NEK1 342 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 ANKRD30BLA7E2S9 258 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 SRRM5B3KS81 715 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 WIPF1O43516 503 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 NDUFA2O43678 99 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 T-ENOLP0DO92 83 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 RAP2AP10114 183 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 CALB2P22676 271 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 HSD11B1P28845 292 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 GRK5P34947 590 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 OPRL1P41146 370 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 ZNF121P58317 390 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 BPIFB3P59826 476 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 MZT1Q08AG7 82 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 TIGD6Q17RP2 521 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 C11orf53Q8IXP5 236 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 TIGD4Q8IY51 512 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 SGK3Q96BR1 496 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 CLPTM1LQ96KA5 538 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 CCT8L2Q96SF2 557 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 RASSF4Q9H2L5 321 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 ZNF696Q9H7X3 374 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 DNAJC27Q9NZQ0 273 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 ZNF319Q9P2F9 582 aa10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 PRPF19Q9UMS4 504 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-205ENST00000508319 IGHV3OR15-7A0A075B7D8 119 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 CENPVL3A0A0U1RRI6 287 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 H3BN98 237 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 P2RY10O00398 339 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 TOX4O94842 621 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 GLCEO94923 617 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 LIPFP07098 398 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 MDKP21741 143 aaPredicted RBP10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 GSTT1P30711 240 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 GSK3AP49840 483 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 CSNK2BP67870 215 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 GK3PQ14409 553 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 C16orf87Q6PH81 154 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 WDR82Q6UXN9 313 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 Q6YL49 198 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 FAM57BQ71RH2 274 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 ADGRG5Q8IZF4 528 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 FGFRL1Q8N441 504 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 PNLDC1Q8NA58 520 aaKnown RBP10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 OR1M1Q8NGA1 313 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 OR52H1Q8NGJ2 320 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 OR8S1Q8NH09 359 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 GIPC3Q8TF64 312 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 LRRC29Q8WV35 223 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 WDFY2Q96P53 400 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 SIRPDQ9H106 197 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 TLNRD1Q9H1K6 362 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 PPP1R3EQ9H7J1 279 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 RNPEPL1Q9HAU8 725 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 KAAG1Q9UBP8 84 aa10.76□□□□□ -0.69
HMGCS1-205ENST00000508319 WNK1Q9H4A3 2382 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 A0A1B0GW55 424 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 FAM181BA6NEQ2 426 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 POM121CA8CG34 1229 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 DVL1O14640 695 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 ACOT8O14734 319 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 FAM107AO95990 144 aa10.75□□□□□ -0.69
HMGCS1-205ENST00000508319 APOC1P02654 83 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms