RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 NT5DC3Q86UY8 548 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 PAQR7Q86WK9 346 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 CDKL3Q8IVW4 592 aaPredicted RBP2.13□□□□□ -2.07
RFC1-209ENST00000504974 TMEM61Q8N0U2 210 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 SLC25A45Q8N413 288 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 RNF10Q8N5U6 811 aaKnown RBP2.13□□□□□ -2.07
RFC1-209ENST00000504974 UBL4BQ8N7F7 174 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 ARIH2OSQ8N7S6 290 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 FNDC5Q8NAU1 212 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 LMX1AQ8TE12 382 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 PIH1D2Q8WWB5 315 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 NAT6Q93015 286 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.13□□□□□ -2.07
RFC1-209ENST00000504974 LRRC45Q96CN5 670 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 HAUS1Q96CS2 278 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 IMP4Q96G21 291 aaKnown RBP2.13□□□□□ -2.07
RFC1-209ENST00000504974 PPP1R2P1Q96PQ5 205 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 ALS2CR12Q96Q35 445 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 OR2M4Q96R27 311 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 TRIB3Q96RU7 358 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 SDHCQ99643 169 aaPredicted RBP2.13□□□□□ -2.07
RFC1-209ENST00000504974 C20orf85Q9H1P6 137 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 GBA3Q9H227 469 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 TCEAL2Q9H3H9 227 aaPredicted RBP2.13□□□□□ -2.07
RFC1-209ENST00000504974 YY1AP1Q9H869 796 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 QPCTLQ9NXS2 382 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 ZNF223Q9UK11 482 aaPredicted RBP2.13□□□□□ -2.07
RFC1-209ENST00000504974 TFR2Q9UP52 801 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 SLC17A4Q9Y2C5 497 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 KCNIP3Q9Y2W7 256 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 SLC25A15Q9Y619 301 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 U3KQA8 63 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 SHANK1Q9Y566 2161 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 PIKFYVEQ9Y2I7 2098 aa2.13□□□□□ -2.07
RFC1-209ENST00000504974 SEC16AO15027 2179 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 A0A0U1RQS6 177 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 LOC285095A0A1B0GVY8 99 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 BTBD17A6NE02 478 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 D6RAR5 112 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 HSD17B6O14756 317 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 ZW10O43264 779 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 TIMM8AO60220 97 aaPredicted RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 SPAG6O75602 509 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 MOSP00540 346 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 FGF1P05230 155 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 CHTF8P0CG12 524 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 PSG2P11465 335 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 RCC1P18754 421 aaPredicted RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 MDKP21741 143 aaPredicted RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 SLC2A5P22732 501 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 BTCP35070 178 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 SPAM1P38567 509 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 DLX1P56177 255 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 EIF3EP60228 445 aaKnown RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 KRTAP10-8P60410 259 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 CDK16Q00536 496 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 TNFRSF17Q02223 184 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 ACVR1Q04771 509 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 PDIA2Q13087 525 aaKnown RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 CHIT1Q13231 466 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 OR5I1Q13606 314 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 PRPSAP1Q14558 356 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 IHHQ14623 411 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 MPPED2Q15777 294 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 KCTD16Q68DU8 428 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 CYB5R2Q6BCY4 276 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 KDELC1Q6UW63 502 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 PRSS41Q7RTY9 318 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 PID1Q7Z2X4 250 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 EFL1Q7Z2Z2 1120 aaKnown RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 NUDCD3Q8IVD9 361 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 LRRC8AQ8IWT6 810 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 ZNF567Q8N184 647 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 TRAM1L1Q8N609 369 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 ZNF433Q8N7K0 673 aaPredicted RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 CCDC54Q8NEL0 328 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 FAM110BQ8TC76 370 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 ACTL9Q8TC94 416 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 MAGEE2Q8TD90 523 aaPredicted RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 DTX3LQ8TDB6 740 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 BLOC1S5Q8TDH9 187 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 ANP32BQ92688 251 aaKnown RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 IL22RA2Q969J5 263 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 TMEM159Q96B96 161 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 C10orf35Q96D05 121 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 COQ2Q96H96 371 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 COX14Q96I36 57 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 ITCHQ96J02 903 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 SLC35E1Q96K37 410 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 FCRL1Q96LA6 429 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 ZNF285Q96NJ3 590 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 TBL1YQ9BQ87 522 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 NRIP2Q9BQI9 281 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 HDHD3Q9BSH5 251 aaPredicted RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 RIOK2Q9BVS4 552 aaKnown RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 FRMD8P1Q9BZ68 369 aaPredicted RBP2.12□□□□□ -2.07
RFC1-209ENST00000504974 TRABDQ9H4I3 376 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 SYNDIG1Q9H7V2 258 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 MCCC2Q9HCC0 563 aa2.12□□□□□ -2.07
RFC1-209ENST00000504974 ASCL3Q9NQ33 180 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms