RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 LHBP01229 141 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 LYNP07948 512 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 SLC2A5P22732 501 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 GSK3AP49840 483 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 RASSF2P50749 326 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 PTGES3Q15185 160 aaKnown RBP13.02□□□□□ -0.33
LIMS2-216ENST00000494613 SLC35D3Q5M8T2 416 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 FAHD1Q6P587 224 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 DCDC5Q6ZRR9 648 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 ZNF826PQ6ZT77 177 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 C11orf53Q8IXP5 236 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 BPIFB2Q8N4F0 458 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 OR8B3Q8NGG8 313 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 OR5K1Q8NHB7 308 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 PGAM5Q96HS1 289 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 OR8B2Q96RD0 313 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 MRI1Q9BV20 369 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 SUCNR1Q9BXA5 334 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 OR10A2Q9H208 303 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 PPP1R3EQ9H7J1 279 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 SLC25A19Q9HC21 320 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 PAPOLBQ9NRJ5 636 aaKnown RBP13.02□□□□□ -0.33
LIMS2-216ENST00000494613 C14orf119Q9NWQ9 140 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 C1orf123Q9NWV4 160 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 NUP50Q9UKX7 468 aa13.02□□□□□ -0.33
LIMS2-216ENST00000494613 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.01□□□□□ -0.33
LIMS2-216ENST00000494613 LGALS8O00214 317 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 ATP5HO75947 161 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 ALOX5APP20292 161 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 CFL1P23528 166 aaKnown RBP13.01□□□□□ -0.33
LIMS2-216ENST00000494613 PSMB10P40306 273 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 NAA10P41227 235 aaPredicted RBP13.01□□□□□ -0.33
LIMS2-216ENST00000494613 PITPNBP48739 271 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 RPS7P62081 194 aaKnown RBP13.01□□□□□ -0.33
LIMS2-216ENST00000494613 MZT1Q08AG7 82 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 APOFQ13790 326 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 WDR25Q64LD2 544 aaPredicted RBP13.01□□□□□ -0.33
LIMS2-216ENST00000494613 LRRN1Q6UXK5 716 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 NLRC3Q7RTR2 1065 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 BCL6BQ8N143 479 aaPredicted RBP13.01□□□□□ -0.33
LIMS2-216ENST00000494613 FAM216AQ8WUB2 273 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 DNAJC9Q8WXX5 260 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 JMJD8Q96S16 334 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 CLN8Q9UBY8 286 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 ZNF69Q9UC07 566 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 KLHDC2Q9Y2U9 406 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 RHBDD3Q9Y3P4 386 aa13.01□□□□□ -0.33
LIMS2-216ENST00000494613 IGHV2-70DA0A0C4DH43 119 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 hCG_38984A0A1B0GV85 526 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 C3orf80F5H4A9 247 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 G3V2T6 193 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 TRIM77I1YAP6 450 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 POU4F2Q12837 409 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 OR8B8Q15620 311 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 TUSC1Q2TAM9 212 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 GFOD2Q3B7J2 385 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 ARMCX4Q5H9R4 360 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 BTNL3Q6UXE8 466 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 ZDHHC22Q8N966 263 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 OR8S1Q8NH09 359 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 DACT3Q96B18 629 aaPredicted RBP13□□□□□ -0.33
LIMS2-216ENST00000494613 YIPF3Q9GZM5 350 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 RASSF4Q9H2L5 321 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 MMADHCQ9H3L0 296 aaPredicted RBP13□□□□□ -0.33
LIMS2-216ENST00000494613 ESM1Q9NQ30 184 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 LAMP5Q9UJQ1 280 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 AP4S1Q9Y587 144 aa13□□□□□ -0.33
LIMS2-216ENST00000494613 TRAV38-1A0A0B4J264 116 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 A6NLC8 198 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 NDUFA2O43678 99 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 MITFO75030 526 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-216ENST00000494613 PPIAL4GP0DN37 164 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 ESRRGP62508 458 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 EFNB1P98172 346 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 KCNJ8Q15842 424 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 ATP6AP1Q15904 470 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 KRT77Q7Z794 578 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 AMIGO2Q86SJ2 522 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 WDR86Q86TI4 376 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 PARP8Q8N3A8 854 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 GCSAMQ8N6F7 178 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 CSNK2A3Q8NEV1 391 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 LYZL4Q96KX0 146 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 NUDT16L1Q9BRJ7 211 aaKnown RBP12.99□□□□□ -0.33
LIMS2-216ENST00000494613 RGCCQ9H4X1 137 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 NIPAL2Q9H841 368 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 KIF17Q9P2E2 1029 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 ERVK-18Q9QC07 812 aa12.99□□□□□ -0.33
LIMS2-216ENST00000494613 DOCK11Q5JSL3 2073 aa12.98□□□□□ -0.33
LIMS2-216ENST00000494613 hCG_1807616A0A1W2PRN6 198 aa12.98□□□□□ -0.33
LIMS2-216ENST00000494613 CCDC182A6NF36 153 aa12.98□□□□□ -0.33
LIMS2-216ENST00000494613 OOEPA6NGQ2 149 aa12.98□□□□□ -0.33
LIMS2-216ENST00000494613 PSMD9O00233 223 aa12.98□□□□□ -0.33
LIMS2-216ENST00000494613 PHYHO14832 338 aa12.98□□□□□ -0.33
LIMS2-216ENST00000494613 PRKYO43930 277 aa12.98□□□□□ -0.33
LIMS2-216ENST00000494613 GYPAP02724 150 aa12.98□□□□□ -0.33
LIMS2-216ENST00000494613 FASP25445 335 aa12.98□□□□□ -0.33
LIMS2-216ENST00000494613 EPHA2P29317 976 aa12.98□□□□□ -0.33
LIMS2-216ENST00000494613 NPY4RP50391 375 aa12.98□□□□□ -0.33
LIMS2-216ENST00000494613 BCDIN3DQ7Z5W3 292 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms