RNA–Protein interactions for RNA: ENST00000487673.5

PTK7-215, Transcript of protein tyrosine kinase 7 (inactive), human

TSL 2

Gene PTK7, Length 5,282 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK7-215	ENST00000487673	SSX3	Q99909	188 aa		12.81	□□□□□ -0.36
PTK7-215	ENST00000487673	LTBP1	Q14766	1721 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	OR6C68	A6NDL8	312 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	SLC17A2	O00624	439 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	ANKRD34C	P0C6C1	535 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	OMG	P23515	440 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	GNG3	P63215	75 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	FBXL14	Q8N1E6	418 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	ZNF808	Q8N4W9	903 aa	Predicted RBP	12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	CELF2-AS1	Q8N7Q2	184 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	HEYL	Q9NQ87	328 aa	Predicted RBP	12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	UNC13C	Q8NB66	2214 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	KANSL1	Q7Z3B3	1105 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	S1PR3	Q99500	378 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	DDA1	Q9BW61	102 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	ZNF71	Q9NQZ8	489 aa	Predicted RBP	12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	CES1P1	Q9UKY3	287 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	ST3GAL6	Q9Y274	331 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	BTBD17	A6NE02	478 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	EPPIN	O95925	133 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	SFTPC	P11686	197 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	MGMT	P16455	207 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	BMP5	P22003	454 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	GAL	P22466	123 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	ARL3	P36405	182 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	OXA1L	Q15070	435 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	SSX2	Q16385	188 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	RBPMS	Q93062	196 aa	Known RBP	12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	KCNIP2	Q9NS61	270 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	FBXL2	Q9UKC9	423 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	KIF13B	Q9NQT8	1826 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	ANKRD33B	A6NCL7	494 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	DNPH1	O43598	174 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	ZNF32	P17041	273 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	EVX1	P49640	407 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	GABRG1	Q8N1C3	465 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	CA5BP1	Q8WTZ4	195 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	FN3KRP	Q9HA64	309 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	PILRA	Q9UKJ1	303 aa		12.8	□□□□□ -0.36
PTK7-215	ENST00000487673	HYAL3	O43820	417 aa	Predicted RBP	12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	FTH1P19	P0C7X4	201 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	FGF5	P12034	268 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	ALOX5AP	P20292	161 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	CMTM4	Q8IZR5	234 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	PAQR8	Q8TEZ7	354 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	HSD17B6	O14756	317 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	FBXO24	O75426	580 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	TMEM108	Q6UXF1	575 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	TMEM200A	Q86VY9	491 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	SLC35G3	Q8N808	338 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	UQCC2	Q9BRT2	126 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	ZNF355P	Q9NSJ1	428 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673		A0A0B4J203	849 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	ANKRD34B	A5PLL1	514 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	CT45A8	P0DMV1	189 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	CT45A9	P0DMV2	189 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	MLF1	P58340	268 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	SSBP1	Q04837	148 aa	Known RBP	12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	CT45A2	Q5DJT8	189 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	OR10K2	Q6IF99	312 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	OR10R2	Q8NGX6	335 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	HAS2	Q92819	552 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	FGF11	Q92914	225 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	FBXO17	Q96EF6	278 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	C4orf45	Q96LM5	186 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	MOGAT1	Q96PD6	335 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	ICAM5	Q9UMF0	924 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	GVINP1	Q7Z2Y8	2422 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	LIPT2	A6NK58	231 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	NUPL2	O15504	423 aa	Known RBP	12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	EPX	P11678	715 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	CDKN2A	P42771	156 aa	Known RBP	12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	ASAH1	Q13510	395 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	PABPC1L2A	Q5JQF8	200 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	AVPI1	Q5T686	147 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	SHE	Q5VZ18	495 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	FAM185A	Q8N0U4	392 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	SLC30A7	Q8NEW0	376 aa		12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	EXOG	Q9Y2C4	368 aa	Known RBP	12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	MN1	Q10571	1320 aa	Predicted RBP	12.79	□□□□□ -0.36
PTK7-215	ENST00000487673	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	LALBA	P00709	142 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	ZNF705D	P0CH99	300 aa	Predicted RBP	12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	ZNF705B	P0CI00	300 aa	Predicted RBP	12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	FOSL1	P15407	271 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	PNLIPRP3	Q17RR3	467 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	EDARADD	Q8WWZ3	215 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	BORCS7	Q96B45	105 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	RBMXL1	Q96E39	390 aa	Known RBP	12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	SCARF2	Q96GP6	870 aa	Predicted RBP	12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	DOK1	Q99704	481 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	AKR1C1	Q04828	323 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	SPATA46	Q5T0L3	261 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	SLC23A3	Q6PIS1	610 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	THSD4	Q6ZMP0	1018 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	OR13G1	Q8NGZ3	307 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	SLAMF9	Q96A28	289 aa		12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	ZNF2	Q9BSG1	426 aa	Predicted RBP	12.78	□□□□□ -0.36
PTK7-215	ENST00000487673	PRDM6	Q9NQX0	595 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms