RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	NAA10	P41227	235 aa	Predicted RBP	12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	BNIP1	Q12981	228 aa		12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	WDR25	Q64LD2	544 aa	Predicted RBP	12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	SFRP4	Q6FHJ7	346 aa	Predicted RBP	12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	FAHD1	Q6P587	224 aa		12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	C11orf53	Q8IXP5	236 aa		12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	BCL6B	Q8N143	479 aa	Predicted RBP	12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	SIGLECL1	Q8N7X8	197 aa		12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	RAB40A	Q8WXH6	277 aa		12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	MRI1	Q9BV20	369 aa		12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	ZNF556	Q9HAH1	456 aa		12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	C1orf123	Q9NWV4	160 aa		12.52	□□□□□ -0.41
CCNL1-222	ENST00000479596	CCDC182	A6NF36	153 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	C22orf46	C9J442	243 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	C3orf80	F5H4A9	247 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	LGALS8	O00214	317 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	FCN3	O75636	299 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	APOC1	P02654	83 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	GRP	P07492	148 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	LYN	P07948	512 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	H2BFM	P0C1H6	154 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	PPIAL4G	P0DN37	164 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	EGR1	P18146	543 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	DDOST	P39656	456 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	GSK3A	P49840	483 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	DAP	P51397	102 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	TIGD6	Q17RP2	521 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	SLC35D3	Q5M8T2	416 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	LRRN1	Q6UXK5	716 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	NLRC3	Q7RTR2	1065 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	GCSAM	Q8N6F7	178 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	ZNF454	Q8N9F8	522 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	SPERT	Q8NA61	448 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	OR52H1	Q8NGJ2	320 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	UPRT	Q96BW1	309 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	NRBF2	Q96F24	287 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	PLEKHA8	Q96JA3	519 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	C1orf147	Q96MC9	270 aa	Predicted RBP	12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	ZNF48	Q96MX3	618 aa	Predicted RBP	12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	JMJD8	Q96S16	334 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	BRD7	Q9NPI1	651 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	CLN8	Q9UBY8	286 aa		12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	SOX21	Q9Y651	276 aa	Predicted RBP	12.51	□□□□□ -0.41
CCNL1-222	ENST00000479596	KIR2DS1	A0A191URI9	304 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	OOEP	A6NGQ2	149 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	ANKRD30BL	A7E2S9	258 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	PRR32	B1ATL7	298 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	TRIM77	I1YAP6	450 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	PHYH	O14832	338 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	LHB	P01229	141 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	FPR2	P25090	351 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	ACKR3	P25106	362 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	COMP	P49747	757 aa	Predicted RBP	12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	HCCS	P53701	268 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	CRISP1	P54107	249 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	UBA52	P62987	128 aa	Known RBP	12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	OR8B8	Q15620	311 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	GFOD2	Q3B7J2	385 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	BTNL3	Q6UXE8	466 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	DOK3	Q7L591	496 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	FAM90A1	Q86YD7	464 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	PARP8	Q8N3A8	854 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	BOLL	Q8N9W6	283 aa	Known RBP	12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	THEM6	Q8WUY1	208 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	LYZL4	Q96KX0	146 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	NUDT16L1	Q9BRJ7	211 aa	Known RBP	12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	OR10A2	Q9H208	303 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	SP140L	Q9H930	580 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	SMURF1	Q9HCE7	757 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	RHBDD3	Q9Y3P4	386 aa		12.5	□□□□□ -0.41
CCNL1-222	ENST00000479596	IGHV3OR16-10	A0A075B7F0	116 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	TMEM89	A2RUT3	159 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	PLAT	P00750	562 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	ALOX5AP	P20292	161 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	PSMA6	P60900	246 aa	Known RBP	12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	ACTG1	P63261	375 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	CSNK2B	P67870	215 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	APOF	Q13790	326 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	TEX36	Q5VZQ5	186 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	OR1M1	Q8NGA1	313 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	OR8B12	Q8NGG6	310 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	OR8S1	Q8NH09	359 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	DNAJC9	Q8WXX5	260 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	ITPKC	Q96DU7	683 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	PGAM5	Q96HS1	289 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	FGF23	Q9GZV9	251 aa	Predicted RBP	12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	TLNRD1	Q9H1K6	362 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	MMADHC	Q9H3L0	296 aa	Predicted RBP	12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	RGCC	Q9H4X1	137 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	C14orf119	Q9NWQ9	140 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	TVP23B	Q9NYZ1	205 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596	LRP12	Q9Y561	859 aa		12.49	□□□□□ -0.41
CCNL1-222	ENST00000479596		A6NLC8	198 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596		M0R129	80 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	PRKY	O43930	277 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	MITF	O75030	526 aa	Predicted RBP	12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	GYPA	P02724	150 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms