RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 ESM1Q9NQ30 184 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 ERVK-18Q9QC07 812 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 DNAJB9Q9UBS3 223 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 CLN8Q9UBY8 286 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 ZNF69Q9UC07 566 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 TCRBV3S1A0A5B6 114 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 C5orf63A6NC05 138 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 ACOD1A6NK06 481 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 FAM183AA6NL82 134 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 PRODHO43272 600 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 TBX1O43435 398 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 E2F6O75461 281 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 TIPRLO75663 272 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 LHBP01229 141 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 ANXA2P07355 339 aaKnown RBP6.07□□□□□ -1.44
PTPRF-210ENST00000463041 H2BFMP0C1H6 154 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 SLC2A1P11166 492 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 CFPP27918 469 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 CFHR2P36980 270 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 OPRL1P41146 370 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 CX3CR1P49238 355 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 UBA52P62987 128 aaKnown RBP6.07□□□□□ -1.44
PTPRF-210ENST00000463041 FOXL1Q12952 345 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 SLC35D3Q5M8T2 416 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 C9orf139Q6ZV77 190 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 SLC16A9Q7RTY1 509 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 PRSS45Q7RTY3 260 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 SPATA24Q86W54 205 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 CPOQ8IVL8 374 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 FTMTQ8N4E7 242 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 IQCF1Q8N6M8 205 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 SIGLECL1Q8N7X8 197 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 C3orf56Q8N813 242 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 CSNK2A3Q8NEV1 391 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 OR56B2PQ8NGI1 322 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 OR8S1Q8NH09 359 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 OTOSQ8NHW6 89 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 THEM6Q8WUY1 208 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 DNAJC9Q8WXX5 260 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 REEP6Q96HR9 211 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 PGAM5Q96HS1 289 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 RGCCQ9H4X1 137 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 NIPAL2Q9H841 368 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 RNPEPL1Q9HAU8 725 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 C1orf123Q9NWV4 160 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 FAM53CQ9NYF3 392 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 ZNF391Q9UJN7 358 aa6.07□□□□□ -1.44
PTPRF-210ENST00000463041 OOEPA6NGQ2 149 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 A6NLC8 198 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 C3orf80F5H4A9 247 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 CLDN34H7C241 214 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 P2RY10O00398 339 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 GSC2O15499 205 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 ADAM20O43506 726 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 ENSAO43768 121 aaKnown RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 FKBP6O75344 327 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 DNAJC8O75937 253 aaPredicted RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 ECDO95905 644 aaPredicted RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 PLATP00750 562 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 LYNP07948 512 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 HKR1P10072 659 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 MUC1P15941 1255 aaPredicted RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 PRKACGP22612 351 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 NAA10P41227 235 aaPredicted RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 GSK3AP49840 483 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 ZNF121P58317 390 aaPredicted RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 CBX1P83916 185 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 BAMBIQ13145 260 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 FLOT2Q14254 428 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 OR8B8Q15620 311 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 SNAPC1Q16533 368 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 MICBQ29980 383 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 KLHL12Q53G59 568 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 TEX36Q5VZQ5 186 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 SFRP4Q6FHJ7 346 aaPredicted RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 PLBD1Q6P4A8 553 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 DEGS2Q6QHC5 323 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 FAM57BQ71RH2 274 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 SPATC1Q76KD6 591 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 C11orf53Q8IXP5 236 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 BCL6BQ8N143 479 aaPredicted RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 PARP8Q8N3A8 854 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 GALNT4Q8N4A0 578 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 GCSAMQ8N6F7 178 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 BOLLQ8N9W6 283 aaKnown RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 PNLDC1Q8NA58 520 aaKnown RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 C19orf18Q8NEA5 215 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 SLC25A28Q96A46 364 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 SLC7A6OSQ96CW6 309 aaPredicted RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 ZMYND19Q96E35 227 aaPredicted RBP6.06□□□□□ -1.44
PTPRF-210ENST00000463041 DMRTB1Q96MA1 342 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 TEAD3Q99594 435 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 MICU1Q9BPX6 476 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 YIPF3Q9GZM5 350 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 PRDM13Q9H4Q3 707 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 SLC25A19Q9HC21 320 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 ABCB9Q9NP78 766 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 ZNF319Q9P2F9 582 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 KAAG1Q9UBP8 84 aa6.06□□□□□ -1.44
PTPRF-210ENST00000463041 POMPQ9Y244 141 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms