RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 NUDT16L1Q9BRJ7 211 aaKnown RBP15.78■□□□□ 0.12
VARS-220ENST00000461874 C14orf119Q9NWQ9 140 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 IGHV3OR16-10A0A075B7F0 116 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 PRR23D1E9PI22 279 aaPredicted RBP15.77■□□□□ 0.12
VARS-220ENST00000461874 C3orf80F5H4A9 247 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 TNFRSF13BO14836 293 aaPredicted RBP15.77■□□□□ 0.12
VARS-220ENST00000461874 HMGN1P05114 100 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 PRR23D2P0DMB1 279 aaPredicted RBP15.77■□□□□ 0.12
VARS-220ENST00000461874 PRKACGP22612 351 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 ZNF121P58317 390 aaPredicted RBP15.77■□□□□ 0.12
VARS-220ENST00000461874 FLOT2Q14254 428 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 DNAL1Q4LDG9 190 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 ZNF826PQ6ZT77 177 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 C9orf139Q6ZV77 190 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 FAM57BQ71RH2 274 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 SPATA24Q86W54 205 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 PARP8Q8N3A8 854 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 C3orf56Q8N813 242 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 MS4A7Q9GZW8 240 aaPredicted RBP15.77■□□□□ 0.12
VARS-220ENST00000461874 MMADHCQ9H3L0 296 aaPredicted RBP15.77■□□□□ 0.12
VARS-220ENST00000461874 ZNF556Q9HAH1 456 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 TRIM36Q9NQ86 728 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 DNAJC27Q9NZQ0 273 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 ZNF319Q9P2F9 582 aa15.77■□□□□ 0.12
VARS-220ENST00000461874 TRAV38-1A0A0B4J264 116 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 hCG_38984A0A1B0GV85 526 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 OOEPA6NGQ2 149 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 A6NLC8 198 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 C22orf46C9J442 243 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 FKBP6O75344 327 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 PLATP00750 562 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 ANXA8P13928 327 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 CFL1P23528 166 aaKnown RBP15.76■□□□□ 0.11
VARS-220ENST00000461874 PRTN3P24158 256 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 NPY4RP50391 375 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 CDK5Q00535 292 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 OR8B8Q15620 311 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 CPOQ8IVL8 374 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 GCSAMQ8N6F7 178 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 ZNF454Q8N9F8 522 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 OR8S1Q8NH09 359 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 OTOSQ8NHW6 89 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 SLC7A6OSQ96CW6 309 aaPredicted RBP15.76■□□□□ 0.11
VARS-220ENST00000461874 C1orf147Q96MC9 270 aaPredicted RBP15.76■□□□□ 0.11
VARS-220ENST00000461874 OR10A2Q9H208 303 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 YY1AP1Q9H869 796 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 FAM53CQ9NYF3 392 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 ERVK-18Q9QC07 812 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 CTSZQ9UBR2 303 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 DNAJB9Q9UBS3 223 aa15.76■□□□□ 0.11
VARS-220ENST00000461874 TCRBV3S1A0A5B6 114 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 DNAJC9-AS1A6NH13 148 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 PRODHO43272 600 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 NDUFA2O43678 99 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 ENSAO43768 121 aaKnown RBP15.75■□□□□ 0.11
VARS-220ENST00000461874 SELENOFO60613 162 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 LHBP01229 141 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 LYNP07948 512 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 H2BFMP0C1H6 154 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 GSK3AP49840 483 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 FGF12P61328 243 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 CBX1P83916 185 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 BAMBIQ13145 260 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 KLHL12Q53G59 568 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 CD276Q5ZPR3 534 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 C11orf53Q8IXP5 236 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 PAPD5Q8NDF8 572 aaKnown RBP15.75■□□□□ 0.11
VARS-220ENST00000461874 BCAS4Q8TDM0 211 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 DUX5Q96PT3 197 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 RGCCQ9H4X1 137 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 ZMAT3Q9HA38 289 aaKnown RBP15.75■□□□□ 0.11
VARS-220ENST00000461874 BRD7Q9NPI1 651 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 POMPQ9Y244 141 aa15.75■□□□□ 0.11
VARS-220ENST00000461874 SOX21Q9Y651 276 aaPredicted RBP15.75■□□□□ 0.11
VARS-220ENST00000461874 TRAV40A0A0B4J280 105 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 hCG_1807616A0A1W2PRN6 198 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 ADAM20O43506 726 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 MTNR1AP48039 350 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 AWAT1Q58HT5 328 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 WDR86Q86TI4 376 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 FAM90A1Q86YD7 464 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.74■□□□□ 0.11
VARS-220ENST00000461874 THEM6Q8WUY1 208 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 PGAM5Q96HS1 289 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 TECTBQ96PL2 329 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 RNPEPL1Q9HAU8 725 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 RHBDD3Q9Y3P4 386 aa15.74■□□□□ 0.11
VARS-220ENST00000461874 CLDN34H7C241 214 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 GYPAP02724 150 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 HKR1P10072 659 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 EGR1P18146 543 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 SLC2A5P22732 501 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 GFOD2Q3B7J2 385 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 SLC35D3Q5M8T2 416 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 TEX36Q5VZQ5 186 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 TMEM236Q5W0B7 351 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 CSNK2A3Q8NEV1 391 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 BBS1Q8NFJ9 593 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 OR1M1Q8NGA1 313 aa15.73■□□□□ 0.11
VARS-220ENST00000461874 TEX12Q9BXU0 123 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms