RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 C7orf66A4D0T2 115 aa12.59□□□□□ -0.39
ITGB4-202ENST00000449880 PRRT4C9JH25 899 aa12.59□□□□□ -0.39
ITGB4-202ENST00000449880 MPC2O95563 127 aa12.59□□□□□ -0.39
ITGB4-202ENST00000449880 CST2P09228 141 aa12.59□□□□□ -0.39
ITGB4-202ENST00000449880 TIGITQ495A1 244 aa12.59□□□□□ -0.39
ITGB4-202ENST00000449880 ZNF813Q6ZN06 617 aa12.59□□□□□ -0.39
ITGB4-202ENST00000449880 TCTEX1D1Q8N7M0 179 aa12.59□□□□□ -0.39
ITGB4-202ENST00000449880 SLAMF6Q96DU3 332 aa12.59□□□□□ -0.39
ITGB4-202ENST00000449880 NUDT9Q9BW91 350 aa12.59□□□□□ -0.39
ITGB4-202ENST00000449880 CHST6Q9GZX3 395 aa12.59□□□□□ -0.39
ITGB4-202ENST00000449880 A0A1W2PR48 441 aa12.58□□□□□ -0.39
ITGB4-202ENST00000449880 LRRC30A6NM36 301 aa12.58□□□□□ -0.39
ITGB4-202ENST00000449880 ZNF749O43361 778 aa12.58□□□□□ -0.39
ITGB4-202ENST00000449880 DUS4LO95620 317 aaKnown RBP12.58□□□□□ -0.39
ITGB4-202ENST00000449880 OPN1MWP04001 364 aa12.58□□□□□ -0.39
ITGB4-202ENST00000449880 OPN1MW2P0DN77 364 aa12.58□□□□□ -0.39
ITGB4-202ENST00000449880 OPN1MW3P0DN78 364 aa12.58□□□□□ -0.39
ITGB4-202ENST00000449880 DHRS2Q13268 280 aa12.58□□□□□ -0.39
ITGB4-202ENST00000449880 TMEM268Q5VZI3 342 aa12.58□□□□□ -0.39
ITGB4-202ENST00000449880 TMPRSS11FQ6ZWK6 438 aa12.58□□□□□ -0.39
ITGB4-202ENST00000449880 BANF2Q9H503 90 aa12.58□□□□□ -0.39
ITGB4-202ENST00000449880 NTNG1Q9Y2I2 539 aa12.58□□□□□ -0.39
ITGB4-202ENST00000449880 RCL1Q9Y2P8 373 aaKnown RBP12.58□□□□□ -0.39
ITGB4-202ENST00000449880 A0A087X0M5 115 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 A0A1B0GX30 115 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 A0A1B0GX78 115 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 ZNF891A8MT65 544 aaPredicted RBP12.58□□□□□ -0.4
ITGB4-202ENST00000449880 ALOX12BO75342 701 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 LY86O95711 162 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 ZNF250P15622 560 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 RBP2P50120 134 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 CCL11P51671 97 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.58□□□□□ -0.4
ITGB4-202ENST00000449880 LCN15Q6UWW0 184 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 ZNF574Q6ZN55 896 aaPredicted RBP12.58□□□□□ -0.4
ITGB4-202ENST00000449880 LRRTM1Q86UE6 522 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 RIMS4Q9H426 269 aaPredicted RBP12.58□□□□□ -0.4
ITGB4-202ENST00000449880 SCN1AP35498 2009 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 ANKRD61A6NGH8 418 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 ENSAO43768 121 aaKnown RBP12.58□□□□□ -0.4
ITGB4-202ENST00000449880 DPTQ07507 201 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 THEM4Q5T1C6 240 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 FAM210BQ96KR6 192 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 DAPP1Q9UN19 280 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 ZNF320A2RRD8 509 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 C9orf170A2RU37 121 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 PRAMEF4O60810 478 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 ZNF528Q3MIS6 628 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 SLC35G3Q8N808 338 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 NECAP1Q8NC96 275 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 ELSPBP1Q96BH3 223 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 NOL4LQ96MY1 436 aaPredicted RBP12.58□□□□□ -0.4
ITGB4-202ENST00000449880 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
ITGB4-202ENST00000449880 GP1BAP07359 652 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 ZNF750Q32MQ0 723 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 LGALSLQ3ZCW2 172 aaPredicted RBP12.57□□□□□ -0.4
ITGB4-202ENST00000449880 TAAR9Q96RI9 348 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 PLA2G12AQ9BZM1 189 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 CHST11Q9NPF2 352 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 ZNF355PQ9NSJ1 428 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 LPAR3Q9UBY5 353 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 ZNF346Q9UL40 294 aaKnown RBP12.57□□□□□ -0.4
ITGB4-202ENST00000449880 A0A1W2PPQ1 181 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 PRSS37A4D1T9 235 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 ABCD3P28288 659 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 IL13RA2Q14627 380 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 INPP5JQ15735 1006 aaPredicted RBP12.57□□□□□ -0.4
ITGB4-202ENST00000449880 PARM1Q6UWI2 310 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 PIGTQ969N2 578 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 MIXL1Q9H2W2 232 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 DUSP13Q9UII6 198 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 WSB1Q9Y6I7 421 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 RBBP6Q7Z6E9 1792 aaKnown RBP12.57□□□□□ -0.4
ITGB4-202ENST00000449880 TRAF3IP2O43734 574 aaPredicted RBP12.57□□□□□ -0.4
ITGB4-202ENST00000449880 TMPRSS11DO60235 418 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 SDHBP21912 280 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 SELENOPP49908 381 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 MAMSTRQ6ZN01 415 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 H2BFWTQ7Z2G1 175 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 RBMXL3Q8N7X1 1067 aaKnown RBP12.57□□□□□ -0.4
ITGB4-202ENST00000449880 OR10P1Q8NGE3 313 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 INTS12Q96CB8 462 aaKnown RBP12.57□□□□□ -0.4
ITGB4-202ENST00000449880 RPUSD4Q96CM3 377 aaKnown RBP12.57□□□□□ -0.4
ITGB4-202ENST00000449880 MBNL1Q9NR56 388 aaKnown RBP12.57□□□□□ -0.4
ITGB4-202ENST00000449880 MIOXQ9UGB7 285 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 COL11A1P12107 1806 aaPredicted RBP12.57□□□□□ -0.4
ITGB4-202ENST00000449880 PRAMEF25A6NGN4 478 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 NXPH2O95156 264 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 LTC4SQ16873 150 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 THNSL2Q86YJ6 484 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 HSD17B8Q92506 261 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 TMED3Q9Y3Q3 217 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 TRAPPC1Q9Y5R8 145 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 A0A1B0GTL3 188 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 ZNF732B4DXR9 585 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 PTBP3O95758 552 aaKnown RBP12.57□□□□□ -0.4
ITGB4-202ENST00000449880 OR5H8P0DN80 308 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 WNT3P56703 355 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 PIGPP57054 158 aa12.57□□□□□ -0.4
ITGB4-202ENST00000449880 ABLIM2Q6H8Q1 611 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms