RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 GINS3Q9BRX5 216 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 ALG12Q9BV10 488 aa17.12■□□□□ 0.33
HMGA1-205ENST00000447654 TCEAL2Q9H3H9 227 aaPredicted RBP17.12■□□□□ 0.33
HMGA1-205ENST00000447654 BORCS7-ASMTA0A0B4J1R7 106 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 A0A1W2PPV9 198 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 FEZF1A0PJY2 475 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 MEGF11A6BM72 1044 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 CDRT15L2A8MXV6 281 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 PEX12O00623 359 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 APODP05090 189 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 OR13C7P0DN81 318 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 AFF3P51826 1226 aaKnown RBP17.11■□□□□ 0.33
HMGA1-205ENST00000447654 ENPP2Q13822 863 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 FJX1Q86VR8 437 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 C1orf87Q8N0U7 546 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 JAGN1Q8N5M9 183 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 LINC01555Q8NAE3 123 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 SDF2Q99470 211 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 A0A087WV48 116 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 K7EQS6 105 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 ITGB1BP1O14713 200 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 FCGR2CP31995 323 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 MLF2Q15773 248 aaPredicted RBP17.11■□□□□ 0.33
HMGA1-205ENST00000447654 ZNF793Q6ZN11 406 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 SLC35E3Q7Z769 313 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 OR2L8Q8NGY9 312 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 OR51F2Q8NH61 342 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 SLC25A43Q8WUT9 341 aaPredicted RBP17.11■□□□□ 0.33
HMGA1-205ENST00000447654 KTI12Q96EK9 354 aaPredicted RBP17.11■□□□□ 0.33
HMGA1-205ENST00000447654 FAM210BQ96KR6 192 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 NUDT9Q9BW91 350 aa17.11■□□□□ 0.33
HMGA1-205ENST00000447654 WSB2Q9NYS7 404 aaPredicted RBP17.11■□□□□ 0.33
HMGA1-205ENST00000447654 USP36Q9P275 1121 aaKnown RBP17.11■□□□□ 0.33
HMGA1-205ENST00000447654 TGIF2-C20orf24A0A0A6YYL0 155 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 A0A1W2PR48 441 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 RAMP1O60894 148 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 NPSP0C0P6 89 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 FSTP19883 344 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 HYAL1Q12794 435 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 ZNF260Q3ZCT1 412 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 TRAPPC6BQ86SZ2 158 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 CDC20BQ86Y33 519 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 SLC16A11Q8NCK7 471 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 TSEN15Q8WW01 171 aaKnown RBP17.1■□□□□ 0.33
HMGA1-205ENST00000447654 TVP23CQ96ET8 276 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 C4orf45Q96LM5 186 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 LMF1Q96S06 567 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 NUDT16L1Q9BRJ7 211 aaKnown RBP17.1■□□□□ 0.33
HMGA1-205ENST00000447654 OR8D2Q9GZM6 311 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 KCNK15Q9H427 330 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 CKLFQ9UBR5 152 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 SUSD2Q9UGT4 822 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 VAX2Q9UIW0 290 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 GPR132Q9UNW8 380 aa17.1■□□□□ 0.33
HMGA1-205ENST00000447654 SNRNP200O75643 2136 aaKnown RBP17.1■□□□□ 0.33
HMGA1-205ENST00000447654 AMBPP02760 352 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 KIR2DL1P43626 348 aaPredicted RBP17.09■□□□□ 0.33
HMGA1-205ENST00000447654 DLX2Q07687 328 aaPredicted RBP17.09■□□□□ 0.33
HMGA1-205ENST00000447654 THNSL2Q86YJ6 484 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 YAF2Q8IY57 180 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 ZNF679Q8IYX0 411 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 BHLHE23Q8NDY6 225 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 TAAR8Q969N4 342 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 ZNF681Q96N22 645 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 NMNAT3Q96T66 252 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 OR11A1Q9GZK7 315 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 GAL3ST2Q9H3Q3 398 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.09■□□□□ 0.33
HMGA1-205ENST00000447654 TMEM14AQ9Y6G1 99 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 ZNF780BQ9Y6R6 833 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 CDC14BO60729 498 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 RND2P52198 227 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 TMEM33P57088 247 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 RPP30P78346 268 aaKnown RBP17.09■□□□□ 0.33
HMGA1-205ENST00000447654 IQCJQ1A5X6 159 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 CLEC18BQ6UXF7 455 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 OR13C3Q8NGS6 347 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 METTL8Q9H825 291 aaKnown RBP17.09■□□□□ 0.33
HMGA1-205ENST00000447654 Q9N2J8 555 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 MYOTQ9UBF9 498 aa17.09■□□□□ 0.33
HMGA1-205ENST00000447654 VCANP13611 3396 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 A0A1B0GVT2 93 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 GLOD5A6NK44 160 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 ZNF264O43296 627 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 CHRM2P08172 466 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 HRH1P35367 487 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 DMWDQ09019 674 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 ZNF343Q6P1L6 599 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 NAXEQ8NCW5 288 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 OR10AC1Q8NH08 325 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 MARCH1Q8TCQ1 289 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 OR10C1Q96KK4 312 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 GPX7Q96SL4 187 aaPredicted RBP17.08■□□□□ 0.33
HMGA1-205ENST00000447654 SLC2A4RGQ9NR83 387 aa17.08■□□□□ 0.33
HMGA1-205ENST00000447654 IGKV1-8A0A0C4DH67 115 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 FIGNL2A6NMB9 653 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 ZNF727A8MUV8 499 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 FTCDNL1E5RQL4 147 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 LDB3O75112 727 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 ZNF217O75362 1048 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms