RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ZNF69Q9UC07 566 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 LRCH1Q9Y2L9 728 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 PPIAL4AQ9Y536 164 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 IGHV3OR16-10A0A075B7F0 116 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 A0A0A6YYJ9 748 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 hCG_38984A0A1B0GV85 526 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 A0A1B0GW55 424 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 CCDC182A6NF36 153 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 C22orf46C9J442 243 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 IFNL4K9M1U5 179 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 TNFRSF13BO14836 293 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-203ENST00000444440 PRODHO43272 600 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 TBX1O43435 398 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 APOC1P02654 83 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 ANXA2P07355 339 aaKnown RBP9.06□□□□□ -0.96
SF3A1-203ENST00000444440 DUX4L2P0CJ85 424 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 DUX4L3P0CJ86 424 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 DUX4L4P0CJ87 422 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 DUX4L5P0CJ88 424 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 DUX4L6P0CJ89 424 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 DUX4L7P0CJ90 424 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 IGHV4-38-2P0DP08 117 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 NAA10P41227 235 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-203ENST00000444440 ACTR3P61158 418 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 GRB2P62993 217 aaKnown RBP9.06□□□□□ -0.96
SF3A1-203ENST00000444440 PAX8Q06710 450 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 PTGES3Q15185 160 aaKnown RBP9.06□□□□□ -0.96
SF3A1-203ENST00000444440 SLC35D3Q5M8T2 416 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 SFRP4Q6FHJ7 346 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-203ENST00000444440 DUX4L9Q6RFH8 374 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-203ENST00000444440 USP43Q70EL4 1123 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 FAM57BQ71RH2 274 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 RHOUQ7L0Q8 258 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 C11orf53Q8IXP5 236 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 FGFRL1Q8N441 504 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 GCSAMQ8N6F7 178 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 ZNF418Q8TF45 676 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-203ENST00000444440 NEIL1Q96FI4 390 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-203ENST00000444440 REEP6Q96HR9 211 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 LYZL4Q96KX0 146 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 SEMA6AQ9H2E6 1030 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 BRD7Q9NPI1 651 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 MRPL15Q9P015 296 aaKnown RBP9.06□□□□□ -0.96
SF3A1-203ENST00000444440 H2AFY2Q9P0M6 372 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-203ENST00000444440 DUX4Q9UBX2 424 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 AUP1Q9Y679 476 aa9.06□□□□□ -0.96
SF3A1-203ENST00000444440 IGHV2-70DA0A0C4DH43 119 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 XRCC2O43543 280 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 GMDSO60547 372 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 MITFO75030 526 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-203ENST00000444440 FSTL3O95633 263 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 GRPP07492 148 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 ACKR3P25106 362 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 HSD11B1P28845 292 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 EPHA2P29317 976 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 PSMB10P40306 273 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 RPS7P62081 194 aaKnown RBP9.05□□□□□ -0.96
SF3A1-203ENST00000444440 GNB2P62879 340 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 CSNK2BP67870 215 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 POU4F2Q12837 409 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 KPNB1Q14974 876 aaKnown RBP9.05□□□□□ -0.96
SF3A1-203ENST00000444440 GFOD2Q3B7J2 385 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 WDR25Q64LD2 544 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-203ENST00000444440 KDM4DQ6B0I6 523 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 LRRN1Q6UXK5 716 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 DCDC5Q6ZRR9 648 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 BCDIN3DQ7Z5W3 292 aaKnown RBP9.05□□□□□ -0.96
SF3A1-203ENST00000444440 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-203ENST00000444440 C1orf87Q8N0U7 546 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 SIGLECL1Q8N7X8 197 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 ZNF454Q8N9F8 522 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 BOLLQ8N9W6 283 aaKnown RBP9.05□□□□□ -0.96
SF3A1-203ENST00000444440 OTOSQ8NHW6 89 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 PYDC1Q8WXC3 89 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 TAF15Q92804 592 aaKnown RBP eCLIP9.05□□□□□ -0.96
SF3A1-203ENST00000444440 SEH1LQ96EE3 360 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 DUX5Q96PT3 197 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 GABARAPL1Q9H0R8 117 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 RASSF4Q9H2L5 321 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 TOR3AQ9H497 397 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 SMURF1Q9HCE7 757 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 C1orf123Q9NWV4 160 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 RNF7Q9UBF6 113 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 MIOXQ9UGB7 285 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 ORC6Q9Y5N6 252 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 TRRAPQ9Y4A5 3859 aa9.05□□□□□ -0.96
SF3A1-203ENST00000444440 IGHV3OR15-7A0A075B7D8 119 aa9.04□□□□□ -0.96
SF3A1-203ENST00000444440 MDFIC2A0A1B0GVS7 189 aa9.04□□□□□ -0.96
SF3A1-203ENST00000444440 LRRC30A6NM36 301 aa9.04□□□□□ -0.96
SF3A1-203ENST00000444440 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-203ENST00000444440 PSMD9O00233 223 aa9.04□□□□□ -0.96
SF3A1-203ENST00000444440 PRKYO43930 277 aa9.04□□□□□ -0.96
SF3A1-203ENST00000444440 LYNP07948 512 aa9.04□□□□□ -0.96
SF3A1-203ENST00000444440 MRPL3P09001 348 aaKnown RBP9.04□□□□□ -0.96
SF3A1-203ENST00000444440 PITPNBP48739 271 aa9.04□□□□□ -0.96
SF3A1-203ENST00000444440 GSK3AP49840 483 aa9.04□□□□□ -0.96
SF3A1-203ENST00000444440 APOFQ13790 326 aa9.04□□□□□ -0.96
SF3A1-203ENST00000444440 OR8B8Q15620 311 aa9.04□□□□□ -0.96
SF3A1-203ENST00000444440 TIGD6Q17RP2 521 aa9.04□□□□□ -0.96
SF3A1-203ENST00000444440 ARMCX4Q5H9R4 360 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms