RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 C19orf18Q8NEA5 215 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 OR6N2Q8NGY6 317 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 DVL3Q92997 716 aaPredicted RBP12.71□□□□□ -0.37
USB1-202ENST00000423271 SLAMF6Q96DU3 332 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 INTS14Q96SY0 518 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 TMEM246Q9BRR3 403 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 SUCNR1Q9BXA5 334 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 DCLRE1BQ9H816 532 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 MARCH7Q9H992 704 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 CENPMQ9NSP4 180 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 UFSP2Q9NUQ7 469 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 NKX1-2Q9UD57 310 aaPredicted RBP12.71□□□□□ -0.37
USB1-202ENST00000423271 OR5V1Q9UGF6 321 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 LRCH1Q9Y2L9 728 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 AUP1Q9Y679 476 aa12.71□□□□□ -0.37
USB1-202ENST00000423271 FAM20BO75063 409 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 CDC42P60953 191 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 ACTG1P63261 375 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 PAX2Q02962 417 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 MPPED2Q15777 294 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 ZNF404Q494X3 552 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 ARMCX4Q5H9R4 360 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 KLF17Q5JT82 389 aaPredicted RBP12.7□□□□□ -0.38
USB1-202ENST00000423271 TEX30Q5JUR7 227 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 AADACL4Q5VUY2 407 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 DRAM2Q6UX65 266 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 ZDHHC22Q8N966 263 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 FAM81AQ8TBF8 368 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 HRASLS5Q96KN8 279 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 KCNJ15Q99712 375 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 ADAT1Q9BUB4 502 aaKnown RBP12.7□□□□□ -0.38
USB1-202ENST00000423271 SSBP3Q9BWW4 388 aaPredicted RBP12.7□□□□□ -0.38
USB1-202ENST00000423271 N6AMT1Q9Y5N5 214 aa12.7□□□□□ -0.38
USB1-202ENST00000423271 LRRC30A6NM36 301 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 ZNF878C9JN71 531 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 TRIM77I1YAP6 450 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 DLGAP1O14490 977 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 NAA10P41227 235 aaPredicted RBP12.69□□□□□ -0.38
USB1-202ENST00000423271 TAF13Q15543 124 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 OR8G1Q15617 311 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 OGFRL1Q5TC84 451 aaPredicted RBP12.69□□□□□ -0.38
USB1-202ENST00000423271 LCN1P1Q5VSP4 162 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 NXNL2Q5VZ03 156 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 LYPD2Q6UXB3 125 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 C12orf54Q6X4T0 127 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 DPY19L4Q7Z388 723 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 C1orf87Q8N0U7 546 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 CELF2-AS1Q8N7Q2 184 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 Q8TCH9 128 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 FAM216AQ8WUB2 273 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 UBE2FQ969M7 185 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 NEIL1Q96FI4 390 aaPredicted RBP12.69□□□□□ -0.38
USB1-202ENST00000423271 TEAD3Q99594 435 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 ZNF69Q9UC07 566 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 MIOXQ9UGB7 285 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 PPIAL4AQ9Y536 164 aa12.69□□□□□ -0.38
USB1-202ENST00000423271 GGT3PA6NGU5 568 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 H0YHG0 523 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 CASQ2O14958 399 aaPredicted RBP12.68□□□□□ -0.38
USB1-202ENST00000423271 MRPL3P09001 348 aaKnown RBP12.68□□□□□ -0.38
USB1-202ENST00000423271 IRF2P14316 349 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 CD80P33681 288 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 GNB2P62879 340 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 PAX8Q06710 450 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 EIF2B1Q14232 305 aaKnown RBP12.68□□□□□ -0.38
USB1-202ENST00000423271 MEPCEQ7L2J0 689 aaKnown RBP12.68□□□□□ -0.38
USB1-202ENST00000423271 SHFQ7M4L6 423 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 BCL6BQ8N143 479 aaPredicted RBP12.68□□□□□ -0.38
USB1-202ENST00000423271 PACRGLQ8N7B6 248 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 SIGLECL1Q8N7X8 197 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 OR56B2PQ8NGI1 322 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 OR8J1Q8NGP2 316 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 OR11L1Q8NGX0 322 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 DACT3Q96B18 629 aaPredicted RBP12.68□□□□□ -0.38
USB1-202ENST00000423271 JMJD8Q96S16 334 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 AMELYQ99218 206 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 MRI1Q9BV20 369 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 FAM118AQ9NWS6 357 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 IMPAD1Q9NX62 359 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 SMPD3Q9NY59 655 aaPredicted RBP12.68□□□□□ -0.38
USB1-202ENST00000423271 DNAJC27Q9NZQ0 273 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 H2AFY2Q9P0M6 372 aaPredicted RBP12.68□□□□□ -0.38
USB1-202ENST00000423271 NUP50Q9UKX7 468 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 GMPPBQ9Y5P6 360 aa12.68□□□□□ -0.38
USB1-202ENST00000423271 IGHV3OR16-10A0A075B7F0 116 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 IGHV2-70DA0A0C4DH43 119 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 LOC100130705A0A1B0GUX0 176 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 FSTL3O95633 263 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 PTBP3O95758 552 aaKnown RBP12.67□□□□□ -0.38
USB1-202ENST00000423271 FPR2P25090 351 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 PITPNBP48739 271 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 CX3CR1P49238 355 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 SLC34A1Q06495 639 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 TUSC1Q2TAM9 212 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 GID4Q8IVV7 300 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 OR8B3Q8NGG8 313 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 ERGIC1Q969X5 290 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 RDH12Q96NR8 316 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 OR8B2Q96RD0 313 aa12.67□□□□□ -0.38
USB1-202ENST00000423271 ABHD6Q9BV23 337 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms