RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 COX10Q12887 443 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 TRAP1Q12931 704 aaKnown RBP6.38□□□□□ -1.39
LSM5-202ENST00000409292 MPPED2Q15777 294 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 RABL3Q5HYI8 236 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 FGD3Q5JSP0 725 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 AGBL2Q5U5Z8 902 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 SLC35E4Q6ICL7 350 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 COLCA1Q6ZS62 124 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 TSEN54Q7Z6J9 526 aaKnown RBP6.38□□□□□ -1.39
LSM5-202ENST00000409292 CALHM3Q86XJ0 350 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 OR51G2Q8NGK0 314 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 H1FXQ92522 213 aaKnown RBP6.38□□□□□ -1.39
LSM5-202ENST00000409292 ZNF799Q96GE5 643 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 NPFFR1Q9GZQ6 430 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 RANBP3Q9H6Z4 567 aaPredicted RBP6.38□□□□□ -1.39
LSM5-202ENST00000409292 RNPEPL1Q9HAU8 725 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 NRIP3Q9NQ35 241 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 RHCGQ9UBD6 479 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 CTSZQ9UBR2 303 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 DNAJB11Q9UBS4 358 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 SF3B6Q9Y3B4 125 aaKnown RBP6.38□□□□□ -1.39
LSM5-202ENST00000409292 IER3IP1Q9Y5U9 82 aa6.38□□□□□ -1.39
LSM5-202ENST00000409292 TRRAPQ9Y4A5 3859 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 A0A087WUU8 490 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 hCG_1809904A0A1W2PP81 198 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 A0A1W2PPE2 198 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 A0A1W2PQ09 198 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 A0A1W2PR64 198 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 A0A1W2PRV1 198 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 UNC119BA6NIH7 251 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 ANXA2P2A6NMY6 339 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 IMPA2O14732 288 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 XRCC2O43543 280 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 APOC1P02654 83 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 ALDOBP05062 364 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 H1F0P07305 194 aaKnown RBP6.37□□□□□ -1.39
LSM5-202ENST00000409292 FAHP16930 419 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 CFL1P23528 166 aaKnown RBP6.37□□□□□ -1.39
LSM5-202ENST00000409292 RBMXP38159 391 aaKnown RBP6.37□□□□□ -1.39
LSM5-202ENST00000409292 IFNGR2P38484 337 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 KIR2DS4P43632 304 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 GZMMP51124 257 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 CRYBA2P53672 197 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 SMIM11AP58511 58 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 HIST1H3AP68431 136 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 VAX1Q5SQQ9 334 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 KPRPQ5T749 579 aaPredicted RBP6.37□□□□□ -1.39
LSM5-202ENST00000409292 HIST2H3PS2Q5TEC6 136 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 CORO6Q6QEF8 472 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 SMARCD3Q6STE5 483 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 DRAM2Q6UX65 266 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 HIST2H3AQ71DI3 136 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 FAM122BQ7Z309 247 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 DPY19L4Q7Z388 723 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 PAPD5Q8NDF8 572 aaKnown RBP6.37□□□□□ -1.39
LSM5-202ENST00000409292 OR5D13Q8NGL4 314 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 C12orf43Q96C57 262 aaKnown RBP6.37□□□□□ -1.39
LSM5-202ENST00000409292 MED30Q96HR3 178 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 RSRC1Q96IZ7 334 aaKnown RBP6.37□□□□□ -1.39
LSM5-202ENST00000409292 ERMAPQ96PL5 475 aaPredicted RBP6.37□□□□□ -1.39
LSM5-202ENST00000409292 GPX7Q96SL4 187 aaPredicted RBP6.37□□□□□ -1.39
LSM5-202ENST00000409292 MICU1Q9BPX6 476 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 METTL8Q9H825 291 aaKnown RBP6.37□□□□□ -1.39
LSM5-202ENST00000409292 SIRT7Q9NRC8 400 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 LHFPL6Q9Y693 200 aa6.37□□□□□ -1.39
LSM5-202ENST00000409292 VWFP04275 2813 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 H0YAE9 185 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 IDH3BO43837 385 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 PTBP3O95758 552 aaKnown RBP6.36□□□□□ -1.39
LSM5-202ENST00000409292 TXNDC12O95881 172 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 VSIG10L2P0DP72 767 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 GSTT1P30711 240 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 SLC15A1P46059 708 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 UBE2E1P51965 193 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 LGALS4P56470 323 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 DCTN2Q13561 401 aaKnown RBP6.36□□□□□ -1.39
LSM5-202ENST00000409292 MEP1BQ16820 701 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 RFX4Q33E94 735 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 TEX36Q5VZQ5 186 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 SLC18B1Q6NT16 456 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 Q6ZPA2 131 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 C1orf122Q6ZSJ8 110 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 LINC00346Q8IVM7 164 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 LNX2Q8N448 690 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 KLHDC1Q8N7A1 406 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 OR9Q1Q8NGQ5 310 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 SLC7A13Q8TCU3 470 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 LRRC29Q8WV35 223 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 FAM162AQ96A26 154 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 CCL13Q99616 98 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 COPS4Q9BT78 406 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 IFT27Q9BW83 186 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 DNTTIP1Q9H147 329 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 SMURF1Q9HCE7 757 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 ABCB9Q9NP78 766 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 PRPF19Q9UMS4 504 aaKnown RBP6.36□□□□□ -1.39
LSM5-202ENST00000409292 B9D1Q9UPM9 204 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 SIGLEC7Q9Y286 467 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 MAB21L2Q9Y586 359 aa6.36□□□□□ -1.39
LSM5-202ENST00000409292 N6AMT1Q9Y5N5 214 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms