RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ADAM20O43506 726 aa17.49■□□□□ 0.39
VSX1-201ENST00000376707 NDUFA2O43678 99 aa17.49■□□□□ 0.39
VSX1-201ENST00000376707 GRK5P34947 590 aa17.49■□□□□ 0.39
VSX1-201ENST00000376707 SLC15A1P46059 708 aa17.49■□□□□ 0.39
VSX1-201ENST00000376707 TMEM179BQ7Z7N9 219 aa17.49■□□□□ 0.39
VSX1-201ENST00000376707 PCGF1Q9BSM1 259 aa17.49■□□□□ 0.39
VSX1-201ENST00000376707 hCG_1807616A0A1W2PRN6 198 aa17.48■□□□□ 0.39
VSX1-201ENST00000376707 OOEPA6NGQ2 149 aa17.48■□□□□ 0.39
VSX1-201ENST00000376707 HOXA3O43365 443 aaPredicted RBP17.48■□□□□ 0.39
VSX1-201ENST00000376707 DDOSTP39656 456 aa17.48■□□□□ 0.39
VSX1-201ENST00000376707 BPIFB3P59826 476 aa17.48■□□□□ 0.39
VSX1-201ENST00000376707 GRB2P62993 217 aaKnown RBP17.48■□□□□ 0.39
VSX1-201ENST00000376707 EIF2B1Q14232 305 aaKnown RBP17.48■□□□□ 0.39
VSX1-201ENST00000376707 DEFB112Q30KQ8 113 aa17.48■□□□□ 0.39
VSX1-201ENST00000376707 DNAL1Q4LDG9 190 aa17.48■□□□□ 0.39
VSX1-201ENST00000376707 C16orf87Q6PH81 154 aa17.48■□□□□ 0.39
VSX1-201ENST00000376707 ZNF826PQ6ZT77 177 aa17.48■□□□□ 0.39
VSX1-201ENST00000376707 IQCF1Q8N6M8 205 aa17.48■□□□□ 0.39
VSX1-201ENST00000376707 OR8S1Q8NH09 359 aa17.48■□□□□ 0.39
VSX1-201ENST00000376707 MARCH7Q9H992 704 aa17.48■□□□□ 0.39
VSX1-201ENST00000376707 ANKRD30BLA7E2S9 258 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 POM121CA8CG34 1229 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 H3BN98 237 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 GYG2O15488 501 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 LIPFP07098 398 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 ANXA2P07355 339 aaKnown RBP17.47■□□□□ 0.39
VSX1-201ENST00000376707 HSD11B1P28845 292 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 CFHR2P36980 270 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 CX3CR1P49238 355 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 TIGD6Q17RP2 521 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 PRR31Q5SQ13 230 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 RHOUQ7L0Q8 258 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 SPSB4Q96A44 273 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 TOR3AQ9H497 397 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 SP140LQ9H930 580 aa17.47■□□□□ 0.39
VSX1-201ENST00000376707 PDP1Q9P0J1 537 aaPredicted RBP17.47■□□□□ 0.39
VSX1-201ENST00000376707 FAM183AA6NL82 134 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 ZNF879B4DU55 563 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 P2RY10O00398 339 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 GNGT2O14610 69 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 TOX4O94842 621 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 GLCEO94923 617 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 GYPAP02724 150 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 SFTPBP07988 381 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 GSTT1P30711 240 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 FLOT2Q14254 428 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 SLC16A9Q7RTY1 509 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 DPY19L4Q7Z388 723 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 GCSAMQ8N6F7 178 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 PNLDC1Q8NA58 520 aaKnown RBP17.46■□□□□ 0.39
VSX1-201ENST00000376707 OR6N2Q8NGY6 317 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 BCAS4Q8TDM0 211 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 RNF133Q8WVZ7 376 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 TAF15Q92804 592 aaKnown RBP eCLIP17.46■□□□□ 0.39
VSX1-201ENST00000376707 OTULINQ96BN8 352 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 SLC7A6OSQ96CW6 309 aaPredicted RBP17.46■□□□□ 0.39
VSX1-201ENST00000376707 INTS14Q96SY0 518 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 ZNF696Q9H7X3 374 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 MED20Q9H944 212 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 SMURF1Q9HCE7 757 aa17.46■□□□□ 0.39
VSX1-201ENST00000376707 TCRBV3S1A0A5B6 114 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 TNFRSF13BO14836 293 aaPredicted RBP17.45■□□□□ 0.38
VSX1-201ENST00000376707 APOC1P02654 83 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 PAICSP22234 425 aaKnown RBP17.45■□□□□ 0.38
VSX1-201ENST00000376707 METTL11BQ5VVY1 283 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 RUSC1-AS1Q66K80 236 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 FAM90A1Q86YD7 464 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 ERI1Q8IV48 349 aaKnown RBP17.45■□□□□ 0.38
VSX1-201ENST00000376707 TIGD4Q8IY51 512 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 PAPD5Q8NDF8 572 aaKnown RBP17.45■□□□□ 0.38
VSX1-201ENST00000376707 TMIGD2Q96BF3 282 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 REEP6Q96HR9 211 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 WDFY2Q96P53 400 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 ABHD6Q9BV23 337 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 RASSF4Q9H2L5 321 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 PRDM13Q9H4Q3 707 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 YY1AP1Q9H869 796 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 NOX4Q9NPH5 578 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 TNFRSF19Q9NS68 423 aa17.45■□□□□ 0.38
VSX1-201ENST00000376707 SRRM5B3KS81 715 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 OSMP13725 252 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 FAM3AP98173 230 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 GINS1Q14691 196 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 GFOD2Q3B7J2 385 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 FAM57BQ71RH2 274 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 SHFQ7M4L6 423 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 PRSS45Q7RTY3 260 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 SPATA24Q86W54 205 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 OR52H1Q8NGJ2 320 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 SGK3Q96BR1 496 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 TBX15Q96SF7 602 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 DNAJC27Q9NZQ0 273 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 DNAJB9Q9UBS3 223 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 POMPQ9Y244 141 aa17.44■□□□□ 0.38
VSX1-201ENST00000376707 MGAM2Q2M2H8 2515 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 IGHV3OR15-7A0A075B7D8 119 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 DVL1O14640 695 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 FKBP6O75344 327 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 E2F6O75461 281 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 LHBP01229 141 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms