RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 KDM4BO94953 1096 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 CNOT4O95628 575 aaKnown RBP12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 IGHV3-9P01782 118 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 CHRM2P08172 466 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 MELTFP08582 738 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 PATE4P0C8F1 98 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 NAT2P11245 290 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 EIF2S3P41091 472 aaKnown RBP12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 CD300CQ08708 224 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 RIPPLY1Q0D2K3 151 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 UNC119Q13432 240 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 ZNF169Q14929 603 aaPredicted RBP12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 SFRP5Q5T4F7 317 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 ZBTB37Q5TC79 503 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 TMEM42Q69YG0 159 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 CRIP3Q6Q6R5 217 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 Q6ZS92 163 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 BTN2A1Q7KYR7 527 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 CPEB3Q8NE35 698 aaKnown RBP12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 OR6F1Q8NGZ6 308 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 REEP6Q96HR9 211 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 B3GNT2Q9NY97 397 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 PIGLQ9Y2B2 252 aa12.13□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 OR14I1A6ND48 311 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 XRCC2O43543 280 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 LCATP04180 440 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 PMPCAQ10713 525 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 OR8B8Q15620 311 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 KISS1Q15726 138 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 UBE2V2Q15819 145 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 GFOD2Q3B7J2 385 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 RPUSD3Q6P087 351 aaKnown RBP12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 MTFR2Q6P444 385 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 GLCCI1Q86VQ1 547 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 SNIP1Q8TAD8 396 aaKnown RBP12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 KCNG3Q8TAE7 436 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 AQP3Q92482 292 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 GCDHQ92947 438 aaPredicted RBP12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 SPSB1Q96BD6 273 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 BOD1Q96IK1 185 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 KCNK15Q9H427 330 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 ASPMQ8IZT6 3477 aa12.12□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 C7orf66A4D0T2 115 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 AHRRA9YTQ3 701 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 KLK10O43240 276 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 CCNKO75909 580 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 IL18BPO95998 194 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 DHFRP00374 187 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 LPLP06858 475 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 CSF1P09603 554 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 GIFP27352 417 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 FOXG1P55316 489 aaPredicted RBP12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 FAPQ12884 760 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 TNK1Q13470 666 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 RNASE12Q5GAN4 147 aaKnown RBP12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 AWAT2Q6E213 333 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 PNLDC1Q8NA58 520 aaKnown RBP12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 OR56B4Q8NH76 319 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 AKAP1Q92667 903 aaKnown RBP eCLIP12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 WNT2BQ93097 391 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 FAM46BQ96A09 425 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 SEH1LQ96EE3 360 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 NKX3-1Q99801 234 aaPredicted RBP12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 NEK6Q9HC98 313 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 MRPS28Q9Y2Q9 187 aaKnown RBP12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 LOC400499M0QZD8 3231 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 hCG_38984A0A1B0GV85 526 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 HCKP08631 526 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 PTHLHP12272 177 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 FAHP16930 419 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 PSMB1P20618 241 aaKnown RBP12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 ACKR3P25106 362 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 FAUP35544 74 aaKnown RBP12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 PTGFRP43088 359 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 ACTBP60709 375 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 ACTG1P63261 375 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 FAM3AP98173 230 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 CARTPTQ16568 116 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 ZNF260Q3ZCT1 412 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 OR10K2Q6IF99 312 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 TMEM53Q6P2H8 277 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 GLIPR1L1Q6UWM5 242 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 CCDC36Q8IYA8 594 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 FAM89BQ8N5H3 189 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 OR1K1Q8NGR3 316 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 BCL2L2Q92843 193 aaPredicted RBP12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 CPNE2Q96FN4 548 aaPredicted RBP12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 ST6GAL2Q96JF0 529 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 TECTBQ96PL2 329 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 TAAR6Q96RI8 345 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 KLK13Q9UKR3 277 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 ALG5Q9Y673 324 aa12.11□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 LOC100509620A0A075B734 347 aa12.1□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 A0A096LPE4 126 aa12.1□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 A0A1W2PPZ6 126 aa12.1□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 GMDSO60547 372 aa12.1□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 MT-ND4P03905 459 aa12.1□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 SDHBP21912 280 aa12.1□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 PRKACBP22694 351 aa12.1□□□□□ -0.47
NIPSNAP3A-201ENST00000374767 MECP2P51608 486 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms