RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 RBMXL3Q8N7X1 1067 aaKnown RBP11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 SLC26A10Q8NG04 563 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 OR4C16Q8NGL9 310 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 EXTL1Q92935 676 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 RBPMSQ93062 196 aaKnown RBP11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 TAAR6Q96RI8 345 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 CKLFQ9UBR5 152 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 PRELID1Q9Y255 219 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 FLVCR1Q9Y5Y0 555 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 SESN1Q9Y6P5 492 aa11.59□□□□□ -0.55
SQSTM1-201ENST00000360718 ZNF716A6NP11 495 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 SULT1C2O00338 296 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 SLC17A2O00624 439 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 CD2P06729 351 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 QDPRP09417 244 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 GTF2F2P13984 249 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 S100A11P31949 105 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 PTGS2P35354 604 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 KIR3DL2P43630 455 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 POU3F4P49335 361 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 TMPRSS3P57727 454 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 ACTBP60709 375 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 SEC61A1P61619 476 aaKnown RBP11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 ACTG1P63261 375 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 MPPED2Q15777 294 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 TBR1Q16650 682 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 HIST3H3Q16695 136 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 MEP1BQ16820 701 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 C2orf76Q3KRA6 126 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 GLT8D1Q68CQ7 371 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 ZNF454Q8N9F8 522 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 OR10AC1Q8NH08 325 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 RNF128Q8TEB7 428 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 FAM3DQ96BQ1 224 aa11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 MRPL22Q9NWU5 206 aaKnown RBP11.58□□□□□ -0.55
SQSTM1-201ENST00000360718 ARHGAP21Q5T5U3 1957 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 CIB4A0PJX0 185 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 F5H5P2 479 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 RP2O75695 350 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 IGHG3P01860 377 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 LAP3P28838 519 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 NTF4P34130 210 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 RPS27P42677 84 aaKnown RBP11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 BAMBIQ13145 260 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 ODF4Q2M2E3 257 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 SLC25A47Q6Q0C1 308 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 ZIC4Q8N9L1 334 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 OR51A4Q8NGJ6 313 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 CCDC107Q8WV48 283 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF775Q96BV0 537 aaPredicted RBP11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 ALX4Q9H161 411 aaPredicted RBP11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 SEC61A2Q9H9S3 476 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 MED9Q9NWA0 146 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 KCNG2Q9UJ96 466 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 DHDHQ9UQ10 334 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 NCOA6Q14686 2063 aaPredicted RBP11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 SVILO95425 2214 aa11.58□□□□□ -0.56
SQSTM1-201ENST00000360718 MED12LQ86YW9 2145 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 MPZL1O95297 269 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 VSIG10L2P0DP72 767 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF250P15622 560 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 TEX30Q5JUR7 227 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 Q6ZS92 163 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 AAED1Q7RTV5 226 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 OR2AK2Q8NG84 335 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 ABHD3Q8WU67 409 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 TMEM54Q969K7 222 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 ABHD17AQ96GS6 310 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 CCDC120Q96HB5 630 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 ATG5Q9H1Y0 275 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 LUZP4Q9P127 313 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 hCG_1807616A0A1W2PRN6 198 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 MEGF11A6BM72 1044 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 AQP8O94778 261 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 PPP3CBP16298 524 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 RIDAP52758 137 aaKnown RBP11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 ROM1Q03395 351 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 EIF2B1Q14232 305 aaKnown RBP11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 MCEMP1Q8IX19 187 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 TMEM123Q8N131 208 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 OR52B4Q8NGK2 314 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 TNFAIP8L1Q8WVP5 186 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 PCNPQ8WW12 178 aaKnown RBP11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 FAM122AQ96E09 287 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 ULBP2Q9BZM5 246 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 SLCO5A1Q9H2Y9 848 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 TMEM138Q9NPI0 162 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 OPN4Q9UHM6 478 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 ING1Q9UK53 422 aaPredicted RBP11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 GTF2A1LQ9UNN4 478 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 POLR1DQ9Y2S0 133 aa11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 MAP1BP46821 2468 aaKnown RBP11.57□□□□□ -0.56
SQSTM1-201ENST00000360718 BET1O15155 118 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 B3GALNT1O75752 331 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 PLA2G5P39877 138 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF84P51523 738 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 TAS2R19P59542 299 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 PLA2G7Q13093 441 aa11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 HLXQ14774 488 aaPredicted RBP11.56□□□□□ -0.56
SQSTM1-201ENST00000360718 RNPS1Q15287 305 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms