RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SPEM1Q8N4L4 309 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 OR51A2Q8NGJ7 313 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 OR6M1Q8NGM8 313 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 PTX4Q96A99 478 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 MBD6Q96DN6 1003 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 SLC25A44Q96H78 314 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-202ENST00000360642 C1orf198Q9H425 327 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 UBE2ZQ9H832 354 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-202ENST00000360642 SCPEP1Q9HB40 452 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 CHST11Q9NPF2 352 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 MED11Q9P086 117 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 UBQLN2Q9UHD9 624 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 OR52A1Q9UKL2 312 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 UNC13CQ8NB66 2214 aa6.45□□□□□ -1.38
CLCN3-202ENST00000360642 A0A0A6YYH2 397 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 A6NJ64 397 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 LIPT2A6NK58 231 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 MCRIP1C9JLW8 97 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 NPIPA5E9PKD4 350 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ADAM20O43506 726 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ONECUT2O95948 504 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ZNF823P16415 610 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 NFYAP23511 347 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-202ENST00000360642 AP2S1P53680 142 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-202ENST00000360642 HSF1Q00613 529 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 OPCMLQ14982 345 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 STEAP1BQ6NZ63 245 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 MOB3CQ70IA8 216 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 CDH26Q8IXH8 852 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 MUC20Q8N307 709 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-202ENST00000360642 TMEM229BQ8NBD8 167 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 OR13C3Q8NGS6 347 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 RNF133Q8WVZ7 376 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 DDIT4LQ96D03 193 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 POTEKPQ9BYX7 375 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 MED29Q9NX70 200 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ALKBH4Q9NXW9 302 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 GLTPQ9NZD2 209 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 OPN4Q9UHM6 478 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 NPIPA1Q9UND3 350 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 MED12Q93074 2177 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 IGLV3-32A0A0A0MS00 114 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 LOC101059948A0A1B0GTJ6 334 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 TMEM269A0A1B0GVZ9 245 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 LOC107986453A0A1B0GWG9 222 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 A0A1W2PNV4 684 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 MEIS3P1A6NDR6 274 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 VSTM2BA6NLU5 285 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 HMSDA8MTL9 139 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 M0R233 179 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 LMX1BO60663 402 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ALOX12BO75342 701 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 HEXBP07686 556 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 FREM3P0C091 2139 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 PTGDSP41222 190 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ACTBP60709 375 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 VAMP2P63027 116 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ACTG1P63261 375 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 TLE3Q04726 772 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 FOXF1Q12946 379 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 NKAIN1Q4KMZ8 207 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 NHLRC3Q5JS37 347 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 KLHL24Q6TFL4 600 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 TMEM205Q6UW68 189 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ZNF704Q6ZNC4 412 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-202ENST00000360642 GABRG1Q8N1C3 465 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 OR2AK2Q8NG84 335 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 C2CD4CQ8TF44 421 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 DVL3Q92997 716 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-202ENST00000360642 SCNM1Q9BWG6 230 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 MRPL13Q9BYD1 178 aaKnown RBP6.44□□□□□ -1.38
CLCN3-202ENST00000360642 APMAPQ9HDC9 416 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 FAM206AQ9NX38 181 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 B3GAT1Q9P2W7 334 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ZNF107Q9UII5 783 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-202ENST00000360642 B3GALT5Q9Y2C3 310 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ASCC3Q8N3C0 2202 aaKnown RBP6.44□□□□□ -1.38
CLCN3-202ENST00000360642 TUBAL3A6NHL2 446 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 RGS11O94810 467 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ZNF735P0CB33 412 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 UBCP0CG48 685 aaKnown RBP6.44□□□□□ -1.38
CLCN3-202ENST00000360642 AVPR2P30518 371 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 TAS2R19P59542 299 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 POU3F1Q03052 451 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-202ENST00000360642 MPPED2Q15777 294 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 TMEM244Q5VVB8 128 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ZNF813Q6ZN06 617 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 GALNTL5Q7Z4T8 443 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 OR5M1Q8NGP8 315 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 POC1BQ8TC44 478 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 FAM168AQ92567 244 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 CHST6Q9GZX3 395 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 SLCO5A1Q9H2Y9 848 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 WNT16Q9UBV4 365 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 PISDQ9UG56 409 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 CYB5R1Q9UHQ9 305 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 VDAC3Q9Y277 283 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 MAB21L2Q9Y586 359 aa6.44□□□□□ -1.38
CLCN3-202ENST00000360642 ADAMTS9Q9P2N4 1935 aa6.43□□□□□ -1.38
CLCN3-202ENST00000360642 WIPF3A6NGB9 483 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms