RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 RTP2Q5QGT7 225 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 OR2M3Q8NG83 312 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 PTGESO14684 152 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 GP1BAP07359 652 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 CTSCP53634 463 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 STPG2Q8N412 459 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 TMEM231Q9H6L2 316 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 PAX5Q02548 391 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 TMEM81Q6P7N7 255 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 CMTM4Q8IZR5 234 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 S1PR5Q9H228 398 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 CTNSO60931 367 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 NXPH3O95157 252 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 CST5P28325 142 aaPredicted RBP17.61■□□□□ 0.41
HDAC4-201ENST00000345617 TMEM241Q24JQ0 296 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 ARFGAP1Q8N6T3 406 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 KIAA1958Q8N8K9 716 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 CYSLTR2Q9NS75 346 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 DDX60LQ5H9U9 1706 aaKnown RBP17.61■□□□□ 0.41
HDAC4-201ENST00000345617 LAIR1Q6GTX8 287 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 CMBLQ96DG6 245 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 WSB1Q9Y6I7 421 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 HMGN4O00479 90 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 HIST1H1CP16403 213 aaKnown RBP17.6■□□□□ 0.41
HDAC4-201ENST00000345617 EMP3P54852 163 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 PARS2Q7L3T8 475 aaKnown RBP17.6■□□□□ 0.41
HDAC4-201ENST00000345617 POM121L2Q96KW2 1035 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 CDK5R1Q15078 307 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 PRSS45Q7RTY3 260 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 FGF20Q9NP95 211 aaPredicted RBP17.6■□□□□ 0.41
HDAC4-201ENST00000345617 PPP6CO00743 305 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 SCO1O75880 301 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 CLEC2LP0C7M8 214 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 SLC25A4P12235 298 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 PMCHP20382 165 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 GPNMBQ14956 572 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 IGFBP7Q16270 282 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 HSF5Q4G112 596 aaPredicted RBP17.6■□□□□ 0.41
HDAC4-201ENST00000345617 TRAT1Q6PIZ9 186 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 SCMH1Q96GD3 660 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 OR5G3P0C626 314 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 SCRG1O75711 98 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 SLC35G1Q2M3R5 365 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 FAM71E1Q6IPT2 247 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 GPR32P1Q8NGA4 272 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 SIRT3Q9NTG7 399 aaPredicted RBP17.6■□□□□ 0.41
HDAC4-201ENST00000345617 PRSS21Q9Y6M0 314 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 ALS2Q96Q42 1657 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 FCN1O00602 326 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 C1orf61Q13536 156 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 LYSMD4Q5XG99 296 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 POLR2IP36954 125 aaKnown RBP17.6■□□□□ 0.41
HDAC4-201ENST00000345617 LTC4SQ16873 150 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 MAP1LC3CQ9BXW4 147 aa17.6■□□□□ 0.41
HDAC4-201ENST00000345617 CGGBP1Q9UFW8 167 aaPredicted RBP17.6■□□□□ 0.41
HDAC4-201ENST00000345617 LIPNQ5VXI9 398 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 CPEB2Q7Z5Q1 589 aaKnown RBP17.59■□□□□ 0.41
HDAC4-201ENST00000345617 NUMBLQ9Y6R0 609 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 FDX2Q6P4F2 183 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 LRP11Q86VZ4 500 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 AGBL5Q8NDL9 886 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 C20orf27Q9GZN8 174 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 FGF9P31371 208 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-201ENST00000345617 IL23AQ9NPF7 189 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 DLK1P80370 383 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 FABP5Q01469 135 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 PLPP6Q8IY26 295 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 RTN4IP1Q8WWV3 396 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-201ENST00000345617 MBPP02686 304 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-201ENST00000345617 MDH2P40926 338 aaKnown RBP17.59■□□□□ 0.41
HDAC4-201ENST00000345617 Q6ZSR9 355 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 CRYGNQ8WXF5 182 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 C11orf40Q8WZ69 217 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 SLC45A2Q9UMX9 530 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 CD38P28907 300 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 HSD17B13Q7Z5P4 300 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-201ENST00000345617 NUDCD2Q8WVJ2 157 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 MACROD1Q9BQ69 325 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 WNK3Q9BYP7 1800 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 A0A087WV62 115 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 OR5D13Q8NGL4 314 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 WDR81Q562E7 1941 aa17.59■□□□□ 0.41
HDAC4-201ENST00000345617 ABHD17CQ6PCB6 329 aa17.58■□□□□ 0.41
HDAC4-201ENST00000345617 CD3DP04234 171 aa17.58■□□□□ 0.41
HDAC4-201ENST00000345617 ARIH2OSQ8N7S6 290 aa17.58■□□□□ 0.41
HDAC4-201ENST00000345617 ZNF511Q8NB15 262 aa17.58■□□□□ 0.41
HDAC4-201ENST00000345617 SLAMF6Q96DU3 332 aa17.58■□□□□ 0.41
HDAC4-201ENST00000345617 M0R135 149 aa17.58■□□□□ 0.41
HDAC4-201ENST00000345617 SCD5Q86SK9 330 aa17.58■□□□□ 0.41
HDAC4-201ENST00000345617 ZNF799Q96GE5 643 aa17.58■□□□□ 0.41
HDAC4-201ENST00000345617 PPP1R3CQ9UQK1 317 aa17.58■□□□□ 0.41
HDAC4-201ENST00000345617 FIGNL2A6NMB9 653 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 WDR1O75083 606 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 QDPRP09417 244 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 ZNF542PQ5EBM4 170 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 GPR87Q9BY21 358 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.58■□□□□ 0.4
HDAC4-201ENST00000345617 SLC22A20A6NK97 555 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 AQP7P3A6NL99 342 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms