RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 OR8B12Q8NGG6 310 aa6.8□□□□□ -1.32
CNOT4-201ENST00000315544 OMA1Q96E52 524 aa6.8□□□□□ -1.32
CNOT4-201ENST00000315544 ELOVL3Q9HB03 270 aa6.8□□□□□ -1.32
CNOT4-201ENST00000315544 KRCC1Q9NPI7 259 aaPredicted RBP6.8□□□□□ -1.32
CNOT4-201ENST00000315544 TAS2R8Q9NYW2 309 aa6.8□□□□□ -1.32
CNOT4-201ENST00000315544 AKAP7Q9P0M2 348 aaPredicted RBP6.8□□□□□ -1.32
CNOT4-201ENST00000315544 CSMD2Q7Z408 3487 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 TRBV6-6A0A0A6YYG2 114 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 TMEM218A2RU14 115 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 URADA6NGE7 173 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 TUSC2O75896 110 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 RCC1P18754 421 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 ACTR1BP42025 376 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 PSMA6P60900 246 aaKnown RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 ACTR1AP61163 376 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 TMEM69Q5SWH9 247 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 C17orf107Q6ZR85 190 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 GTF3AQ92664 365 aaKnown RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 SERINC1Q9NRX5 453 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 ADGRG4Q8IZF6 3080 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 TMED7-TICAM2A0A0A6YYA0 188 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 IGHV5-10-1A0A0J9YXX1 117 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 LOC107986453A0A1B0GWG9 222 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 A0A1W2PP11 408 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 A8MUA0 341 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 C17orf105B2RV13 164 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 UBE2CO00762 179 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 DHFRP00374 187 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 SPP1P10451 314 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 FOXO1Q12778 655 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 ELOCQ15369 112 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 RPUSD3Q6P087 351 aaKnown RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 GINS3Q9BRX5 216 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 TLNRD1Q9H1K6 362 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 IGKV1-6A0A0C4DH72 117 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 TVP23AA6NH52 213 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 LRRC3CA6NJW4 275 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 ZNF736B4DX44 427 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 TMEM50AO95807 157 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 NAPSAO96009 420 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 ADH6P28332 368 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 GRPRP30550 384 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 HNRNPKP61978 463 aaKnown RBP eCLIP6.79□□□□□ -1.325e-7■□□□□ 10.3
CNOT4-201ENST00000315544 PAX5Q02548 391 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 CLN3Q13286 438 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 ZNF761Q86XN6 746 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 C15orf40Q8WUR7 153 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 FBXO17Q96EF6 278 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 ZNF837Q96EG3 531 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 C5orf30Q96GV9 206 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 C1orf159Q96HA4 380 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 CEP19Q96LK0 163 aa6.79□□□□□ -1.32
CNOT4-201ENST00000315544 ZNF587Q96SQ5 575 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 AKIRIN1Q9H9L7 192 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 MKKSQ9NPJ1 570 aaPredicted RBP6.79□□□□□ -1.32
CNOT4-201ENST00000315544 SLC31A1O15431 190 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 SOCS1O15524 211 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 CREBL2O60519 120 aaPredicted RBP6.78□□□□□ -1.32
CNOT4-201ENST00000315544 TNFP01375 233 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 CSTBP04080 98 aaKnown RBP6.78□□□□□ -1.32
CNOT4-201ENST00000315544 HPNP05981 417 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 BMP7P18075 431 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 SLC25A25Q6KCM7 469 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 C1QL4Q86Z23 238 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 OR4K15Q8NH41 348 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 C11orf40Q8WZ69 217 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 DVL3Q92997 716 aaPredicted RBP6.78□□□□□ -1.32
CNOT4-201ENST00000315544 S100A16Q96FQ6 103 aaKnown RBP6.78□□□□□ -1.32
CNOT4-201ENST00000315544 KLHDC7BQ96G42 594 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 POM121Q96HA1 1249 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 C5orf34Q96MH7 638 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 ZNF700Q9H0M5 742 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 PRTFDC1Q9NRG1 225 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 C9orf172C9J069 976 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 IFNA7P01567 189 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 MUC1P15941 1255 aaPredicted RBP6.78□□□□□ -1.32
CNOT4-201ENST00000315544 DUSP3P51452 185 aaPredicted RBP6.78□□□□□ -1.32
CNOT4-201ENST00000315544 SLC16A1P53985 500 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 PCGF3Q3KNV8 242 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 GLYATL3Q5SZD4 288 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 PMEPA1Q969W9 287 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 C10orf35Q96D05 121 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 RSRP1Q9BUV0 290 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 OR11A1Q9GZK7 315 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 SMOC1Q9H4F8 434 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 PLSCR2Q9NRY7 297 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 COA3Q9Y2R0 106 aaPredicted RBP6.78□□□□□ -1.32
CNOT4-201ENST00000315544 DEDDO75618 318 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 SFT2D2O95562 160 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 APOBEC1P41238 236 aaKnown RBP6.78□□□□□ -1.32
CNOT4-201ENST00000315544 LPAR6P43657 344 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 ZNF81P51508 661 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 TAS2R19P59542 299 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 TMEM187Q14656 261 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 SURF2Q15527 256 aaPredicted RBP6.78□□□□□ -1.32
CNOT4-201ENST00000315544 PDLIM3Q53GG5 364 aaPredicted RBP6.78□□□□□ -1.32
CNOT4-201ENST00000315544 PDSS1Q5T2R2 415 aa6.78□□□□□ -1.32
CNOT4-201ENST00000315544 C16orf47Q6ZP98 133 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms