RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 MRPL15Q9P015 296 aaKnown RBP10.19□□□□□ -0.78
SNX29-207ENST00000568949 IGHV3OR15-7A0A075B7D8 119 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 A0A087WUU8 490 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 A0A1W2PRD5 423 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 A0A1W2PRF3 423 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 A0A1W2PRM7 423 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 hCG_1807616A0A1W2PRN6 198 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 BBIP1A8MTZ0 92 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 IMPA2O14732 288 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 PTP4A3O75365 173 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 FBXO24O75426 580 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 NDUFB2O95178 105 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 PPP1R3DO95685 299 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 GRPP07492 148 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 CRABP1P29762 137 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 KDELR2P33947 212 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 GGT2P36268 569 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 GPR4P46093 362 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 CENPAP49450 140 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 POU4F2Q12837 409 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 TRAP1Q12931 704 aaKnown RBP10.18□□□□□ -0.78
SNX29-207ENST00000568949 KLRD1Q13241 179 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 AANATQ16613 207 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 MEP1BQ16820 701 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 MICBQ29980 383 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 NSUN5P1Q3KNT7 163 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 RABL3Q5HYI8 236 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 COQ5Q5HYK3 327 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 C11orf87Q6NUJ2 197 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 DNM1P34Q6PK57 102 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 ZNF730Q6ZMV8 503 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 CFAP77Q6ZQR2 320 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 NAA40Q86UY6 237 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 NDUFA11Q86Y39 141 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 FGFRL1Q8N441 504 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 OR8J3Q8NGG0 315 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 C8orf46Q8TAG6 207 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 LZICQ8WZA0 190 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 TPD52L3Q96J77 140 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 GPX7Q96SL4 187 aaPredicted RBP10.18□□□□□ -0.78
SNX29-207ENST00000568949 CCL13Q99616 98 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 PITX2Q99697 317 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 SSX3Q99909 188 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 ATF6BQ99941 703 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 DCTN5Q9BTE1 182 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 MMP28Q9H239 520 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 RNPEPL1Q9HAU8 725 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 C14orf119Q9NWQ9 140 aa10.18□□□□□ -0.78
SNX29-207ENST00000568949 PRPF19Q9UMS4 504 aaKnown RBP10.18□□□□□ -0.78
SNX29-207ENST00000568949 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.17□□□□□ -0.78
SNX29-207ENST00000568949 A0A1B0GW55 424 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 GGT3PA6NGU5 568 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 SOCS2O14508 198 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 FFAR1O14842 300 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 MPIG6BO95866 241 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 TXNDC12O95881 172 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 DUX4L2P0CJ85 424 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 DUX4L3P0CJ86 424 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 DUX4L4P0CJ87 422 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 DUX4L5P0CJ88 424 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 DUX4L6P0CJ89 424 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 DUX4L7P0CJ90 424 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 VSIG10L2P0DP72 767 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 GRK5P34947 590 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 CDKN2AP42771 156 aaKnown RBP10.17□□□□□ -0.78
SNX29-207ENST00000568949 YAP1P46937 504 aaKnown RBP10.17□□□□□ -0.78
SNX29-207ENST00000568949 TPTEP56180 551 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 SELENOWP63302 87 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 PRB3Q04118 309 aaPredicted RBP10.17□□□□□ -0.78
SNX29-207ENST00000568949 LRRC23Q53EV4 343 aaPredicted RBP10.17□□□□□ -0.78
SNX29-207ENST00000568949 WDR38Q5JTN6 314 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 SLC18B1Q6NT16 456 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 CRIP3Q6Q6R5 217 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 DUX4L9Q6RFH8 374 aaPredicted RBP10.17□□□□□ -0.78
SNX29-207ENST00000568949 PTCHD4Q6ZW05 846 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 TSEN54Q7Z6J9 526 aaKnown RBP10.17□□□□□ -0.78
SNX29-207ENST00000568949 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.17□□□□□ -0.78
SNX29-207ENST00000568949 LYG1Q8N1E2 194 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 PNKDQ8N490 385 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 WFDC9Q8NEX5 89 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 SLC26A10Q8NG04 563 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 SLC7A13Q8TCU3 470 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 C12orf43Q96C57 262 aaKnown RBP10.17□□□□□ -0.78
SNX29-207ENST00000568949 R3HDM4Q96D70 268 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 WWC2-AS2Q96NR7 200 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 NPFFR1Q9GZQ6 430 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 PNRC2Q9NPJ4 139 aaKnown RBP10.17□□□□□ -0.78
SNX29-207ENST00000568949 RHCGQ9UBD6 479 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 DUX4Q9UBX2 424 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 SIGLEC7Q9Y286 467 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 TMEM5Q9Y2B1 443 aa10.17□□□□□ -0.78
SNX29-207ENST00000568949 IGLV1-36A0A0B4J1U3 117 aa10.16□□□□□ -0.78
SNX29-207ENST00000568949 J3KTA2 159 aa10.16□□□□□ -0.78
SNX29-207ENST00000568949 K7EIL1 84 aa10.16□□□□□ -0.78
SNX29-207ENST00000568949 M0R1W7 72 aa10.16□□□□□ -0.78
SNX29-207ENST00000568949 DCTN6O00399 190 aa10.16□□□□□ -0.78
SNX29-207ENST00000568949 NDUFB3O43676 98 aa10.16□□□□□ -0.78
SNX29-207ENST00000568949 IFNW1P05000 195 aa10.16□□□□□ -0.78
SNX29-207ENST00000568949 TGM4P49221 684 aa10.16□□□□□ -0.78
SNX29-207ENST00000568949 DLX1P56177 255 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms