RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 KLHDC2Q9Y2U9 406 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 GGT3PA6NGU5 568 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 CD300LBA8K4G0 201 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 TBX1O43435 398 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 SLC25A16P16260 332 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 ZNF12P17014 697 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 GIFP27352 417 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 ALDH3B1P43353 468 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 PDLIM4P50479 330 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 AQP4P55087 323 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 SLC3A1Q07837 685 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 HLXQ14774 488 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-234ENST00000557703 OR8B8Q15620 311 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 CLEC12BQ2HXU8 276 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 LIPNQ5VXI9 398 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 FAM57BQ71RH2 274 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 TGIF2LYQ8IUE0 185 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 ELMOD2Q8IZ81 293 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 YIPF7Q8N8F6 280 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 UBASH3BQ8TF42 649 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 SGK3Q96BR1 496 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 ELMOD3Q96FG2 381 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 REEP6Q96HR9 211 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 Q9H521 79 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 CHCHD3Q9NX63 227 aaKnown RBP11.67□□□□□ -0.54
SHMT2-234ENST00000557703 MRM2Q9UI43 246 aaKnown RBP11.67□□□□□ -0.54
SHMT2-234ENST00000557703 ITGB1BP2Q9UKP3 347 aa11.67□□□□□ -0.54
SHMT2-234ENST00000557703 DIMT1Q9UNQ2 313 aaKnown RBP11.67□□□□□ -0.54
SHMT2-234ENST00000557703 EXOSC1Q9Y3B2 195 aaKnown RBP11.67□□□□□ -0.54
SHMT2-234ENST00000557703 LOC110117498-PIK3R3F6TDL0 507 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 FAM20BO75063 409 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 CLIC3O95833 236 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 CCDC159P0C7I6 412 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 NAT2P11245 290 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 DAOP14920 347 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 MYL12AP19105 171 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 ACHEP22303 614 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 MYF6P23409 242 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 CRYBB2P43320 205 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 MAP2K3P46734 347 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 SRP9P49458 86 aaKnown RBP11.66□□□□□ -0.54
SHMT2-234ENST00000557703 CCR9P51686 369 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 FAM3AP98173 230 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 GLYATL3Q5SZD4 288 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 OR2T2Q6IF00 324 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 IZUMO2Q6UXV1 221 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 TMPRSS11AQ6ZMR5 421 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 FAM168AQ92567 244 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 C10orf35Q96D05 121 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 PBOV1Q9GZY1 135 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 CHODLQ9H9P2 273 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 SAP30LQ9HAJ7 183 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 ERVK13-1Q9NX77 482 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 SCN3BQ9NY72 215 aa11.66□□□□□ -0.54
SHMT2-234ENST00000557703 CAB39Q9Y376 341 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-234ENST00000557703 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-234ENST00000557703 hCG_38984A0A1B0GV85 526 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 ANKRD30BLA7E2S9 258 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 SSX4O60224 188 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 SRSF10O75494 262 aaKnown RBP11.65□□□□□ -0.54
SHMT2-234ENST00000557703 IGLV3-1P01715 115 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 IGHV1-46P01743 117 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 GNAO1P09471 354 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 SLC2A1P11166 492 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 GATA4P43694 442 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 GSK3AP49840 483 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 ZNF85Q03923 595 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 CCDC58Q4VC31 144 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 BCL2L15Q5TBC7 163 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 RNLSQ5VYX0 342 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 Q6ZSR3 168 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 OR8B12Q8NGG6 310 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 OR52I1Q8NGK6 324 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 CNIH3Q8TBE1 160 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 TMEM80Q96HE8 168 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 SIGLEC11Q96RL6 698 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 ZNF184Q99676 751 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-234ENST00000557703 PIMREGQ9BSJ6 248 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 POFUT1Q9H488 388 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 AMBNQ9NP70 447 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 G6PC2Q9NQR9 355 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 OR52A1Q9UKL2 312 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 MPC1Q9Y5U8 109 aa11.65□□□□□ -0.54
SHMT2-234ENST00000557703 CHD3Q12873 2000 aaKnown RBP11.65□□□□□ -0.54
SHMT2-234ENST00000557703 FLNAP21333 2647 aaKnown RBP11.65□□□□□ -0.54
SHMT2-234ENST00000557703 NDUFS7O75251 213 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 FSTL3O95633 263 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 PTBP3O95758 552 aaKnown RBP11.64□□□□□ -0.55
SHMT2-234ENST00000557703 CST4P01036 141 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 ISG15P05161 165 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 UBCP0CG48 685 aaKnown RBP11.64□□□□□ -0.55
SHMT2-234ENST00000557703 CCL1P22362 96 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 CPT2P23786 658 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 CCL8P80075 99 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 TNFAIP6P98066 277 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-234ENST00000557703 RIPPLY1Q0D2K3 151 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 ZNF181Q2M3W8 571 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 HFEQ30201 348 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 C6orf141Q5SZD1 244 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 C6orf52Q5T4I8 152 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms