RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 KLF9Q13886 244 aaPredicted RBP16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 TMEM178AQ8NBL3 297 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 PLEKHA1Q9HB21 404 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 DIABLOQ9NR28 239 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 SLC7A10Q9NS82 523 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 PAQR5Q9NXK6 330 aaPredicted RBP16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 BOLA1Q9Y3E2 137 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 MEIS3P1A6NDR6 274 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 PRSS12P56730 875 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 CLN3Q13286 438 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 SNTB2Q13425 540 aaKnown RBP16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 PLA1AQ53H76 456 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 CHMP1BQ7LBR1 199 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 ASCL5Q7RTU5 278 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 SLC16A14Q7RTX9 510 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 SKA3Q8IX90 412 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 PHF21AQ96BD5 680 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 SLCO5A1Q9H2Y9 848 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 TMEM138Q9NPI0 162 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 C12orf4Q9NQ89 552 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 SPRR3Q9UBC9 169 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 ALG5Q9Y673 324 aa16.05■□□□□ 0.16
SDR39U1-220ENST00000556548 DCHS1Q96JQ0 3298 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 GGT3PA6NGU5 568 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 ACOT7O00154 380 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 CST2P09228 141 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 CTSSP25774 331 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 FOXG1P55316 489 aaPredicted RBP16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 SCAND1P57086 179 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 GUCA2AQ02747 115 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 SNAI3Q3KNW1 292 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 HACD4Q5VWC8 232 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 FAAP20Q6NZ36 180 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 ZNF627Q7L945 461 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 SPTSSAQ969W0 71 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 FAM46BQ96A09 425 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 SORCS2Q96PQ0 1159 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 CITED4Q96RK1 184 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 PRRX2Q99811 253 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 AIFM2Q9BRQ8 373 aa16.04■□□□□ 0.16
SDR39U1-220ENST00000556548 IGKV3D-15A0A087WSY6 115 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 A0A096LPE4 126 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 TRGV5A0A0B4J1U4 118 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 A0A1W2PPZ6 126 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 INMT-MINDY4F8WBC2 141 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 WISP2O76076 250 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 PTPRZ1P23471 2315 aaPredicted RBP16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 DOK3Q7L591 496 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 LYPD6Q86Y78 171 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 NKAIN3Q8N8D7 197 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 NPRL2Q8WTW4 380 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 MARVELD1Q9BSK0 173 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 BEX2Q9BXY8 128 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 ZMAT3Q9HA38 289 aaKnown RBP16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 ACKR4Q9NPB9 350 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 NUDT15Q9NV35 164 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 RHBDD3Q9Y3P4 386 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 CIB4A0PJX0 185 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 SHOXO15266 292 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 SULT1B1O43704 296 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 PSG4Q00888 419 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 HGFACQ04756 655 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 TMEM255AQ5JRV8 349 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 RIPPLY2Q5TAB7 128 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 SFRP4Q6FHJ7 346 aaPredicted RBP16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 OR14K1Q8NGZ2 314 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 OR2AE1Q8NHA4 323 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 TMEM45BQ96B21 275 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 ST6GAL2Q96JF0 529 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 PLSCR3Q9NRY6 295 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 FAM186AA6NE01 2351 aa16.03■□□□□ 0.16
SDR39U1-220ENST00000556548 LOC390937A0A1W2PQ73 354 aa16.02■□□□□ 0.16
SDR39U1-220ENST00000556548 SYNGR3O43761 229 aa16.02■□□□□ 0.16
SDR39U1-220ENST00000556548 GMDSO60547 372 aa16.02■□□□□ 0.16
SDR39U1-220ENST00000556548 HTR5AP47898 357 aa16.02■□□□□ 0.16
SDR39U1-220ENST00000556548 C1orf100Q5SVJ3 147 aa16.02■□□□□ 0.16
SDR39U1-220ENST00000556548 ADGRE4PQ86SQ3 457 aa16.02■□□□□ 0.16
SDR39U1-220ENST00000556548 OR1F12Q8NHA8 337 aa16.02■□□□□ 0.16
SDR39U1-220ENST00000556548 RNF170Q96K19 258 aa16.02■□□□□ 0.16
SDR39U1-220ENST00000556548 CACNG6Q9BXT2 260 aa16.02■□□□□ 0.16
SDR39U1-220ENST00000556548 SLC17A5Q9NRA2 495 aa16.02■□□□□ 0.16
SDR39U1-220ENST00000556548 EMC3Q9P0I2 261 aa16.02■□□□□ 0.16
SDR39U1-220ENST00000556548 CD37P11049 281 aa16.02■□□□□ 0.15
SDR39U1-220ENST00000556548 OTX1P32242 354 aaPredicted RBP16.02■□□□□ 0.15
SDR39U1-220ENST00000556548 ZNF93P35789 620 aaPredicted RBP16.02■□□□□ 0.15
SDR39U1-220ENST00000556548 TAGLNQ01995 201 aaKnown RBP16.02■□□□□ 0.15
SDR39U1-220ENST00000556548 RAB35Q15286 201 aa16.02■□□□□ 0.15
SDR39U1-220ENST00000556548 MOGAT2Q3SYC2 334 aa16.02■□□□□ 0.15
SDR39U1-220ENST00000556548 TBRG1Q3YBR2 411 aa16.02■□□□□ 0.15
SDR39U1-220ENST00000556548 IGF2-ASQ6U949 168 aa16.02■□□□□ 0.15
SDR39U1-220ENST00000556548 DPAGT1Q9H3H5 408 aa16.02■□□□□ 0.15
SDR39U1-220ENST00000556548 TGM6O95932 706 aa16.01■□□□□ 0.15
SDR39U1-220ENST00000556548 ACTL6AO96019 429 aa16.01■□□□□ 0.15
SDR39U1-220ENST00000556548 HCKP08631 526 aa16.01■□□□□ 0.15
SDR39U1-220ENST00000556548 FAHP16930 419 aa16.01■□□□□ 0.15
SDR39U1-220ENST00000556548 CCL1P22362 96 aa16.01■□□□□ 0.15
SDR39U1-220ENST00000556548 HTR2BP41595 481 aa16.01■□□□□ 0.15
SDR39U1-220ENST00000556548 AP2S1P53680 142 aaPredicted RBP16.01■□□□□ 0.15
SDR39U1-220ENST00000556548 ARF1P84077 181 aaKnown RBP16.01■□□□□ 0.15
SDR39U1-220ENST00000556548 SCRN3Q0VDG4 424 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms