RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ZNF154Q13106 437 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 OR8G1Q15617 311 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 DNAL1Q4LDG9 190 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 DRAM2Q6UX65 266 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 KLBQ86Z14 1044 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 CPOQ8IVL8 374 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 SPICQ8N5J4 248 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 SGK3Q96BR1 496 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 SEH1LQ96EE3 360 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 WNK2Q9Y3S1 2297 aa15.23■□□□□ 0.03
SHMT2-206ENST00000553529 IGHV3OR15-7A0A075B7D8 119 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 A0A1B0GW55 424 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 ARRDC5A6NEK1 342 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 GLCEO94923 617 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 TFF1P04155 84 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 GRPP07492 148 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 MRPL3P09001 348 aaKnown RBP15.22■□□□□ 0.03
SHMT2-206ENST00000553529 DUX4L2P0CJ85 424 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 DUX4L3P0CJ86 424 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 DUX4L4P0CJ87 422 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 DUX4L5P0CJ88 424 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 DUX4L6P0CJ89 424 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 DUX4L7P0CJ90 424 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 OSMP13725 252 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 ZNF12P17014 697 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 CD200P41217 278 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 DAPP51397 102 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 PAX2Q02962 417 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 BNIP1Q12981 228 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 ZNF404Q494X3 552 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 DMRTC1Q5HYR2 192 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 TEX30Q5JUR7 227 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 SLC27A4Q6P1M0 643 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 DUX4L9Q6RFH8 374 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-206ENST00000553529 SLC16A9Q7RTY1 509 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 FGF23Q9GZV9 251 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-206ENST00000553529 RASSF4Q9H2L5 321 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 MARCH7Q9H992 704 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 DUX4Q9UBX2 424 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 INSIG2Q9Y5U4 225 aa15.22■□□□□ 0.03
SHMT2-206ENST00000553529 CCDC182A6NF36 153 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 FOXH1O75593 365 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 IGHV4-38-2P0DP08 117 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 SLC2A5P22732 501 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 OPRL1P41146 370 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 GATA4P43694 442 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 CSNK2BP67870 215 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 FAM3AP98173 230 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 LIPNQ5VXI9 398 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 LRRN1Q6UXK5 716 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 PAPD5Q8NDF8 572 aaKnown RBP15.21■□□□□ 0.03
SHMT2-206ENST00000553529 RNF133Q8WVZ7 376 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 UTP4Q969X6 686 aaKnown RBP15.21■□□□□ 0.03
SHMT2-206ENST00000553529 REEP6Q96HR9 211 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 LYZL4Q96KX0 146 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 ZNF48Q96MX3 618 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-206ENST00000553529 SMURF1Q9HCE7 757 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 C1orf123Q9NWV4 160 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 ZNF69Q9UC07 566 aa15.21■□□□□ 0.03
SHMT2-206ENST00000553529 STAB1Q9NY15 2570 aa15.21■□□□□ 0.02
SHMT2-206ENST00000553529 PPIAL4EA0A075B759 164 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 MDFIC2A0A1B0GVS7 189 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 A8MXK9 166 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 C22orf46C9J442 243 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 PRR23D1E9PI22 279 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-206ENST00000553529 PPIAL4DF5H284 164 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 MAGEB4O15481 346 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-206ENST00000553529 PRR23D2P0DMB1 279 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-206ENST00000553529 PPIAL4FP0DN26 164 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 ZNF841Q6ZN19 808 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 C11orf53Q8IXP5 236 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 ZDHHC22Q8N966 263 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 THEM6Q8WUY1 208 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 PPP1R14AQ96A00 147 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 DACT3Q96B18 629 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-206ENST00000553529 SSBP3Q9BWW4 388 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-206ENST00000553529 DNAJB9Q9UBS3 223 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 COPS3Q9UNS2 423 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 PPIAL4AQ9Y536 164 aa15.2■□□□□ 0.02
SHMT2-206ENST00000553529 hCG_38984A0A1B0GV85 526 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 J3QLI3 93 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 PRKYO43930 277 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 ACKR3P25106 362 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 HSD11B1P28845 292 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 HILS1P60008 231 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 APOFQ13790 326 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 ESCO2Q56NI9 601 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 AMIGO2Q86SJ2 522 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 SIGLECL1Q8N7X8 197 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 NANPQ8TBE9 248 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 Q8TCH9 128 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 SPSB4Q96A44 273 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 C1orf147Q96MC9 270 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-206ENST00000553529 TVP23BQ9NYZ1 205 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 RHBDD3Q9Y3P4 386 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 AUP1Q9Y679 476 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 ANK2Q01484 3957 aa15.19■□□□□ 0.02
SHMT2-206ENST00000553529 GYPAP02724 150 aa15.18■□□□□ 0.02
SHMT2-206ENST00000553529 GMFBP60983 142 aa15.18■□□□□ 0.02
SHMT2-206ENST00000553529 RPS7P62081 194 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms