RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 TMEM163Q8TC26 289 aa16.19■□□□□ 0.18
PTCH1-227ENST00000553256 TMEM165Q9HC07 324 aa16.19■□□□□ 0.18
PTCH1-227ENST00000553256 HAO2Q9NYQ3 351 aa16.19■□□□□ 0.18
PTCH1-227ENST00000553256 IFNL4K9M1U5 179 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 IGLV3-1P01715 115 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 ALPLP05186 524 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 CA6P23280 308 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 SRP9P49458 86 aaKnown RBP16.18■□□□□ 0.18
PTCH1-227ENST00000553256 TAF13Q15543 124 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 OR8B8Q15620 311 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 MPPED2Q15777 294 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 NXNL2Q5VZ03 156 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 MEPCEQ7L2J0 689 aaKnown RBP16.18■□□□□ 0.18
PTCH1-227ENST00000553256 MOGAT3Q86VF5 341 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 GLCCI1Q86VQ1 547 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 RFLNBQ8N5W9 214 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 TCEANCQ8N8B7 351 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 OR52H1Q8NGJ2 320 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 RAB39BQ96DA2 213 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 PLEKHA8Q96JA3 519 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 LYZL4Q96KX0 146 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 SLC22A4Q9H015 551 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 PATZ1Q9HBE1 687 aaKnown RBP16.18■□□□□ 0.18
PTCH1-227ENST00000553256 LPAR2Q9HBW0 351 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 ADGRL4Q9HBW9 690 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 ARHGAP32A7KAX9 2087 aa16.18■□□□□ 0.18
PTCH1-227ENST00000553256 TRAV20A0A0B4J274 112 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 IGHV3-64DA0A0J9YX35 117 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 A8MXK9 166 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 GMDSO60547 372 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 SRSF10O75494 262 aaKnown RBP16.17■□□□□ 0.18
PTCH1-227ENST00000553256 CYB5R3P00387 301 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-227ENST00000553256 APOC1P02654 83 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 PSMA6P60900 246 aaKnown RBP16.17■□□□□ 0.18
PTCH1-227ENST00000553256 DEGS2Q6QHC5 323 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 LRRN1Q6UXK5 716 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 FAM57BQ71RH2 274 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 WDR86Q86TI4 376 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 C11orf53Q8IXP5 236 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 THEM6Q8WUY1 208 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 SPRYD4Q8WW59 207 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-227ENST00000553256 ERGIC1Q969X5 290 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 DACT3Q96B18 629 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-227ENST00000553256 REEP6Q96HR9 211 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 GAL3ST1Q99999 423 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 TEX12Q9BXU0 123 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 TMPRSS13Q9BYE2 586 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 PPP1R3EQ9H7J1 279 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 FAM206AQ9NX38 181 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 USE1Q9NZ43 259 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 LRP12Q9Y561 859 aa16.17■□□□□ 0.18
PTCH1-227ENST00000553256 ANK2Q01484 3957 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 STAB1Q9NY15 2570 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 PPIAL4EA0A075B759 164 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 PPIAL4CA0A0B4J2A2 164 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 SAC3D1A6NKF1 404 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 PPIAL4DF5H284 164 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 TNFRSF13BO14836 293 aaPredicted RBP16.16■□□□□ 0.18
PTCH1-227ENST00000553256 H2BFMP0C1H6 154 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 SBK2P0C263 348 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 PPIAL4FP0DN26 164 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 ACKR3P25106 362 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 HSD11B1P28845 292 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 DCTDP32321 178 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 DDOSTP39656 456 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 SEC61A1P61619 476 aaKnown RBP16.16■□□□□ 0.18
PTCH1-227ENST00000553256 HOXA4Q00056 320 aaPredicted RBP16.16■□□□□ 0.18
PTCH1-227ENST00000553256 PAX2Q02962 417 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 FAM201AQ5SY85 155 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 PRAMEF6Q5VXH4 476 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 ZFP1Q6P2D0 407 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 PLPP7Q8NBV4 271 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 DVL3Q92997 716 aaPredicted RBP16.16■□□□□ 0.18
PTCH1-227ENST00000553256 DNAJC27Q9NZQ0 273 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 OPN4Q9UHM6 478 aa16.16■□□□□ 0.18
PTCH1-227ENST00000553256 GGT3PA6NGU5 568 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 CEACAM18A8MTB9 384 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 EBAG9O00559 213 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 ANXA2P07355 339 aaKnown RBP16.15■□□□□ 0.18
PTCH1-227ENST00000553256 MRPL3P09001 348 aaKnown RBP16.15■□□□□ 0.18
PTCH1-227ENST00000553256 WNT2P09544 360 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 ANPEPP15144 967 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 SRD5A1P18405 259 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 MDH2P40926 338 aaKnown RBP16.15■□□□□ 0.18
PTCH1-227ENST00000553256 GSK3AP49840 483 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 RPS7P62081 194 aaKnown RBP16.15■□□□□ 0.18
PTCH1-227ENST00000553256 PEG10Q86TG7 708 aaKnown RBP16.15■□□□□ 0.18
PTCH1-227ENST00000553256 KLBQ86Z14 1044 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 OR8B12Q8NGG6 310 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 OR8B4Q96RC9 309 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 RBM4BQ9BQ04 359 aaKnown RBP16.15■□□□□ 0.18
PTCH1-227ENST00000553256 ADAT1Q9BUB4 502 aaKnown RBP16.15■□□□□ 0.18
PTCH1-227ENST00000553256 FGF23Q9GZV9 251 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-227ENST00000553256 RGCCQ9H4X1 137 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 NIPAL2Q9H841 368 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 SP140LQ9H930 580 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 ENOPH1Q9UHY7 261 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 WNK2Q9Y3S1 2297 aa16.15■□□□□ 0.18
PTCH1-227ENST00000553256 TRAPPC2LH3BP13 241 aa16.14■□□□□ 0.17
PTCH1-227ENST00000553256 FAM20BO75063 409 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms