RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 FAM166AQ6J272 317 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 GID4Q8IVV7 300 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 SLC35F2Q8IXU6 374 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 ZNF420Q8TAQ5 688 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 RAB1CQ92928 201 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 DVL3Q92997 716 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 EME1Q96AY2 570 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 PGAM5Q96HS1 289 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 C9orf16Q9BUW7 83 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 ORC6Q9Y5N6 252 aa15.43■□□□□ 0.06
SNRPA1-203ENST00000540017 hCG_38984A0A1B0GV85 526 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 LMX1BO60663 402 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 APOL3O95236 402 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 IGHV2-70P01814 119 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 SBK2P0C263 348 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 HTR1FP30939 366 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 SRP9P49458 86 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 MMP16P51512 607 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 PSMA6P60900 246 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 CDC42P60953 191 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 CXCR4P61073 352 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 TIGD6Q17RP2 521 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 KCTD18Q6PI47 426 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 ZBTB49Q6ZSB9 765 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 ZNF771Q7L3S4 317 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 SSX6Q7RTT6 188 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 LINC01356Q8N9X3 169 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 OR8B12Q8NGG6 310 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 OR52H1Q8NGJ2 320 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 OR51G2Q8NGK0 314 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 TIMD4Q96H15 378 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 LYZL4Q96KX0 146 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 OR8B4Q96RC9 309 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 APOL4Q9BPW4 351 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 OR10A2Q9H208 303 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 OPA3Q9H6K4 179 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 PPP1R3EQ9H7J1 279 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 SP140LQ9H930 580 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 AASSQ9UDR5 926 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 WARS2Q9UGM6 360 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 NPTNQ9Y639 398 aa15.42■□□□□ 0.06
SNRPA1-203ENST00000540017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.42■□□□□ 0.062e-8■■■■■ 37.6
SNRPA1-203ENST00000540017 GSK3AP49840 483 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 SLC3A1Q07837 685 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 OR8G1Q15617 311 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 DEGS2Q6QHC5 323 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 MOGAT3Q86VF5 341 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 ZNF679Q8IYX0 411 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 ASB17Q8WXJ9 295 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 STMN2Q93045 179 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 PPP1R14AQ96A00 147 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 ADAT1Q9BUB4 502 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 ZNF665Q9H7R5 613 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 NIPAL2Q9H841 368 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 CLN6Q9NWW5 311 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 FAM206AQ9NX38 181 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 MRPL15Q9P015 296 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 TMEM14AQ9Y6G1 99 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 NAV3Q8IVL0 2385 aa15.41■□□□□ 0.06
SNRPA1-203ENST00000540017 TMEM178BH3BS89 294 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 ENTPD6O75354 484 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 CYB5R3P00387 301 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 IGHV2-5P01817 119 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 CD200P41217 278 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 ZMYND11Q15326 602 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 MPPED2Q15777 294 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 ZSCAN26Q16670 478 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 PRAMEF6Q5VXH4 476 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 ZNF322Q6U7Q0 402 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 TRUB1Q8WWH5 349 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 TBX5Q99593 518 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 MROQ9BYG7 248 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 LPAR2Q9HBW0 351 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 IMPAD1Q9NX62 359 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 IKZF2Q9UKS7 526 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 KCNS2Q9ULS6 477 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 SVEP1Q4LDE5 3571 aa15.4■□□□□ 0.06
SNRPA1-203ENST00000540017 TMEM269A0A1B0GVZ9 245 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 ISPDA4D126 451 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 B4DSR2 109 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 DLGAP1O14490 977 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 GMDSO60547 372 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 ZNF254O75437 659 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 SRSF10O75494 262 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 ZNF205O95201 554 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 PNPP00491 289 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 ACKR3P25106 362 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 DDOSTP39656 456 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 GATA4P43694 442 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 SNRPGP62308 76 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 HOXA4Q00056 320 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 MFGE8Q08431 387 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 FAM201AQ5SY85 155 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 PLEKHG7Q6ZR37 379 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 PEG10Q86TG7 708 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 PRIMA1Q86XR5 153 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 CELF2-AS1Q8N7Q2 184 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 MNTQ99583 582 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 GAL3ST1Q99999 423 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 SLC22A4Q9H015 551 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms