RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 LYZL4Q96KX0 146 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 OR2V2Q96R30 315 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 SIGLEC11Q96RL6 698 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 MNTQ99583 582 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 APOL4Q9BPW4 351 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 TMEM100Q9NV29 134 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 FAM206AQ9NX38 181 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 TREM2Q9NZC2 230 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 MRM2Q9UI43 246 aaKnown RBP11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 N6AMT1Q9Y5N5 214 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 GMPPBQ9Y5P6 360 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 TMEM14AQ9Y6G1 99 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 F5H5P2 479 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 ZNF254O75437 659 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 APOL3O95236 402 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 PTBP3O95758 552 aaKnown RBP11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 PEX2P28328 305 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 GPR6P46095 362 aaPredicted RBP11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 LMO4P61968 165 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 LRRC36Q1X8D7 754 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 OGFRL1Q5TC84 451 aaPredicted RBP11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 KRT74Q7RTS7 529 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 KRT77Q7Z794 578 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 GALNT4Q8N4A0 578 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 OR8B12Q8NGG6 310 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 OR56B2PQ8NGI1 322 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 APH1BQ8WW43 257 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 REEP6Q96HR9 211 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 MEGF10Q96KG7 1140 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 RDH12Q96NR8 316 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 TTTY10Q9BZA0 68 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 EGLN1Q9GZT9 426 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 PPP1R3EQ9H7J1 279 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 GCM1Q9NP62 436 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 BRD7Q9NPI1 651 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 IMPAD1Q9NX62 359 aa11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 SMPD3Q9NY59 655 aaPredicted RBP11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 NKX1-2Q9UD57 310 aaPredicted RBP11.77□□□□□ -0.53
TSPAN4-220ENST00000532375 NF1P21359 2839 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 ARHGAP32A7KAX9 2087 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 A0A1W2PQL4 384 aaPredicted RBP11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 ACOD1A6NK06 481 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 TPD52L2O43399 206 aaKnown RBP11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 TBX1O43435 398 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 PPIHO43447 177 aaKnown RBP11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 OR2T7P0C7T2 308 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 HOXB4P17483 251 aaPredicted RBP11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 CA6P23280 308 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 ACKR3P25106 362 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 DDOSTP39656 456 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 GATA4P43694 442 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 GSK3AP49840 483 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 MMP16P51512 607 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 ZNF85Q03923 595 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 EGR3Q06889 387 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 POU4F2Q12837 409 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 OR8B8Q15620 311 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 HFEQ30201 348 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 MEDAGQ5VYS4 303 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 PACRGLQ8N7B6 248 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 OR2T27Q8NH04 317 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 CLDND2Q8NHS1 167 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 SPRYD4Q8WW59 207 aaPredicted RBP11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 CCL17Q92583 94 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 HPS1Q92902 700 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 RFKQ969G6 155 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 MSI2Q96DH6 328 aaKnown RBP11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 PGAM5Q96HS1 289 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 MROQ9BYG7 248 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 OR10A2Q9H208 303 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 OPA3Q9H6K4 179 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 SP140LQ9H930 580 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 G6PC2Q9NQR9 355 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 MRPL15Q9P015 296 aaKnown RBP11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 EXOGQ9Y2C4 368 aaKnown RBP11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 WIPI2Q9Y4P8 454 aa11.76□□□□□ -0.53
TSPAN4-220ENST00000532375 A0A0U1RQV5 110 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 LOC100289279A0A1B0GTE1 492 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 TMEM269A0A1B0GVZ9 245 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 ERICH4A6NGS2 130 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 GGT3PA6NGU5 568 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 ZNF670-ZNF695F2Z2N8 137 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 PHYHO14832 338 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 WBP4O75554 376 aaKnown RBP11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 TNFRSF1AP19438 455 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 TNFSF4P23510 183 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 CD200P41217 278 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 MTNR1AP48039 350 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 CHN2P52757 468 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 ISL1P61371 349 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 ADARB1P78563 741 aaKnown RBP11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 MFGE8Q08431 387 aaPredicted RBP11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 TIGD6Q17RP2 521 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 AVPI1Q5T686 147 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 CELF2-AS1Q8N7Q2 184 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 ZNF649Q9BS31 505 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 PBOV1Q9GZY1 135 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 RGCCQ9H4X1 137 aa11.75□□□□□ -0.53
TSPAN4-220ENST00000532375 DCLRE1BQ9H816 532 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms