RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	APOBEC3D	Q96AK3	386 aa	Predicted RBP	7.53	□□□□□ -1.2
PTPN20-223	ENST00000509900	TESC	Q96BS2	214 aa		7.53	□□□□□ -1.2
PTPN20-223	ENST00000509900	NUF2	Q9BZD4	464 aa		7.53	□□□□□ -1.2
PTPN20-223	ENST00000509900	CACYBP	Q9HB71	228 aa	Known RBP	7.53	□□□□□ -1.2
PTPN20-223	ENST00000509900	ASIC5	Q9NY37	505 aa		7.53	□□□□□ -1.2
PTPN20-223	ENST00000509900	VNN3	Q9NY84	501 aa		7.53	□□□□□ -1.2
PTPN20-223	ENST00000509900	BTNL2	Q9UIR0	455 aa		7.53	□□□□□ -1.2
PTPN20-223	ENST00000509900	KCNG2	Q9UJ96	466 aa		7.53	□□□□□ -1.2
PTPN20-223	ENST00000509900	ZNF229	Q9UJW7	825 aa		7.53	□□□□□ -1.2
PTPN20-223	ENST00000509900	LYVE1	Q9Y5Y7	322 aa		7.53	□□□□□ -1.2
PTPN20-223	ENST00000509900		A6NLC8	198 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	TRIM64C	A6NLI5	447 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	BLOC1S5-TXNDC5	H3BN57	136 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	TPST1	O60507	370 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	PLIN3	O60664	434 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	FMO6P	O60774	539 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	DEDD	O75618	318 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	GLCE	O94923	617 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	COX7A1	P24310	79 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	SERPINB5	P36952	375 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	DAP3	P51398	398 aa	Known RBP	7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	DYNLT3	P51808	116 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	EMX2	Q04743	252 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	SSX2	Q16385	188 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	DEFB136	Q30KP8	78 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	ABCA11P	Q4W5N1	156 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	ZNF621	Q6ZSS3	439 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	HDDC2	Q7Z4H3	204 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	NANOGNB	Q7Z5D8	188 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	ARMC8	Q8IUR7	673 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	TRIML2	Q8N7C3	387 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	OR5T2	Q8NGG2	359 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	TCP10L	Q8TDR4	215 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	PANX1	Q96RD7	426 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	ADAT1	Q9BUB4	502 aa	Known RBP	7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	HCAR1	Q9BXC0	346 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	ELL3	Q9HB65	397 aa	Predicted RBP	7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	TMEM27	Q9HBJ8	222 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	POLE4	Q9NR33	117 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	ZDHHC18	Q9NUE0	388 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	DCDC2	Q9UHG0	476 aa		7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	UTP11	Q9Y3A2	253 aa	Known RBP	7.52	□□□□□ -1.21
PTPN20-223	ENST00000509900	PSMB11	A5LHX3	300 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	GMNC	A6NCL1	334 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	SH2D7	A6NKC9	451 aa	Predicted RBP	7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	RHBDL1	O75783	438 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	TFF1	P04155	84 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	HIST1H2AB	P04908	130 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	GRP	P07492	148 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	FAM153B	P0C7A2	387 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	UMPS	P11172	480 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	CPA3	P15088	417 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	PRKAR1B	P31321	381 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	DSTN	P60981	165 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	NCALD	P61601	193 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	GK2	Q14410	553 aa	Predicted RBP	7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	DGUOK	Q16854	277 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	ATPAF1	Q5TC12	328 aa	Predicted RBP	7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	STUM	Q69YW2	141 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	HIST3H2A	Q7L7L0	130 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	C10orf107	Q8IVU9	208 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	ZNF695	Q8IW36	515 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	C11orf53	Q8IXP5	236 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	OR9Q1	Q8NGQ5	310 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	OR1F12	Q8NHA8	337 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	ACMSD	Q8TDX5	336 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	HIST1H2AC	Q93077	130 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900		Q96M66	194 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	SPATA25	Q9BR10	227 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	HEXA-AS1	Q9H8Q6	139 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	BCL2L10	Q9HD36	194 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	INIP	Q9NRY2	104 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	ZFP57	Q9NU63	452 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	ADA2	Q9NZK5	511 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	VSX1	Q9NZR4	365 aa	Predicted RBP	7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	MRPL15	Q9P015	296 aa	Known RBP	7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	STX18	Q9P2W9	335 aa	Known RBP	7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	SLC25A10	Q9UBX3	287 aa	Predicted RBP	7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	AURKC	Q9UQB9	309 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	ANGPT4	Q9Y264	503 aa		7.51	□□□□□ -1.21
PTPN20-223	ENST00000509900	VPS13D	Q5THJ4	4388 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	FAM90A22P	A8MWA6	464 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	KPNA4	O00629	521 aa	Predicted RBP	7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	LYPD3	O95274	346 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	KRT75	O95678	551 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	AMY1A	P04745	511 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	AMY2A	P04746	511 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	AZGP1	P25311	298 aa	Known RBP	7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	S100A3	P33764	101 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	GGT2	P36268	569 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	AQP2	P41181	271 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	PAFAH1B1	P43034	410 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	GUCA1A	P43080	201 aa	Predicted RBP	7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	RGS8	P57771	180 aa	Predicted RBP	7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	MAD2L1	Q13257	205 aa	Predicted RBP	7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	CCDC92	Q53HC0	331 aa	Predicted RBP	7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	OTP	Q5XKR4	325 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	MOSPD2	Q8NHP6	518 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	LRRC8C	Q8TDW0	803 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	LRRC29	Q8WV35	223 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms