RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ZNF615Q8N8J6 731 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 OR10G6Q8NH81 332 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 NAT6Q93015 286 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 OR10C1Q96KK4 312 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 AGMATQ9BSE5 352 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 TIMM29Q9BSF4 260 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 CALN1Q9BXU9 219 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 IQCGQ9H095 443 aaKnown RBP1.92□□□□□ -2.1
LSM6-205ENST00000507449 DEFB129Q9H1M3 183 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 CYP3A43Q9HB55 503 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 CD209Q9NNX6 404 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 RPRD1BQ9NQG5 326 aaKnown RBP1.92□□□□□ -2.1
LSM6-205ENST00000507449 WIF1Q9Y5W5 379 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 PLA2R1Q13018 1463 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 COL4A4P53420 1690 aaPredicted RBP1.92□□□□□ -2.1
LSM6-205ENST00000507449 ADGRA3Q8IWK6 1321 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 YEATS2Q9ULM3 1422 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 C7orf66A4D0T2 115 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 SLC22A20A6NK97 555 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 XRCC2O43543 280 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 CDC40O60508 579 aaKnown RBP eCLIP1.91□□□□□ -2.1
LSM6-205ENST00000507449 GLAP06280 429 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 GZMAP12544 262 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 GGT2P36268 569 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 GPR1P46091 355 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 ZNF33AQ06730 810 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 DNAJC3Q13217 504 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 TSC22D1Q15714 1073 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 KLHL40Q2TBA0 621 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 COX19Q49B96 90 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 BHLHA15Q7RTS1 189 aaPredicted RBP1.91□□□□□ -2.1
LSM6-205ENST00000507449 ZNF561Q8N587 486 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 TRAM1L1Q8N609 369 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 CSGALNACT2Q8N6G5 542 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 INO80EQ8NBZ0 244 aaPredicted RBP1.91□□□□□ -2.1
LSM6-205ENST00000507449 PROKR2Q8NFJ6 384 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 LILRB4Q8NHJ6 448 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 ITFG1Q8TB96 612 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 DEDD2Q8WXF8 326 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 HAUS1Q96CS2 278 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 KCNS1Q96KK3 526 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 CSPG4P5Q96PW8 444 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 ANP32EQ9BTT0 268 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 RBFOX1Q9NWB1 397 aaKnown RBP1.91□□□□□ -2.1
LSM6-205ENST00000507449 PEF1Q9UBV8 284 aaKnown RBP1.91□□□□□ -2.1
LSM6-205ENST00000507449 ZNF257Q9Y2Q1 563 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 SIGLEC9Q9Y336 463 aa1.91□□□□□ -2.1
LSM6-205ENST00000507449 AHDC1Q5TGY3 1603 aaPredicted RBP1.91□□□□□ -2.1
LSM6-205ENST00000507449 IGHV7-4-1A0A0J9YVY3 117 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 OR5H1A6NKK0 313 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 A8MUU9 505 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 K7EM74 188 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 TNFRSF11BO00300 401 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 CHST10O43529 356 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 RAD1O60671 282 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 SLC19A2O60779 497 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 CTNSO60931 367 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 MPDU1O75352 247 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 IGHV3-11P01762 117 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 HLA-DQB1P01920 261 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 CATP04040 527 aaKnown RBP1.9□□□□□ -2.11
LSM6-205ENST00000507449 ZNF688P0C7X2 276 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 POLR2MP0CAP2 368 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 SRMP19623 302 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 RAB5AP20339 215 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 ME2P23368 584 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 CFHR2P36980 270 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 CCT6AP40227 531 aaKnown RBP1.9□□□□□ -2.11
LSM6-205ENST00000507449 CCNG1P51959 295 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 UBE2E1P51965 193 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 PNOCQ13519 176 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 DOC2AQ14183 400 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 KDM4DQ6B0I6 523 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 TTC19Q6DKK2 380 aaPredicted RBP1.9□□□□□ -2.11
LSM6-205ENST00000507449 RTL4Q6ZR62 310 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 HMGN2P46Q86SG4 172 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 UNC93AQ86WB7 457 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 MYOCDQ8IZQ8 938 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 TMEM256Q8N2U0 113 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 KIF2BQ8N4N8 673 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 C19orf18Q8NEA5 215 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 TTLQ8NG68 377 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 GHSRQ92847 366 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 ISOC2Q96AB3 205 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 SLC25A46Q96AG3 418 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 KIAA1143Q96AT1 154 aaPredicted RBP1.9□□□□□ -2.11
LSM6-205ENST00000507449 CERS2Q96G23 380 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 FAM19A4Q96LR4 140 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 UBE2E2Q96LR5 201 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 GPR21Q99679 349 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 SCRT1Q9BWW7 348 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 C1orf198Q9H425 327 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 MCUBQ9NWR8 336 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 S4R3C0 116 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 CABIN1Q9Y6J0 2220 aa1.9□□□□□ -2.11
LSM6-205ENST00000507449 PLEKHG2Q9H7P9 1386 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 ARPC4-TTLL3A0A0A6YYG9 625 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 ZNF850A8MQ14 1090 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 RPL36A-HNRNPH2H7BZ11 118 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 FARS2O95363 451 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms