RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 LRRC36Q1X8D7 754 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 HFEQ30201 348 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 SLC25A30Q5SVS4 291 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 LPCAT4Q643R3 524 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 ZNF322Q6U7Q0 402 aaPredicted RBP13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 SSX6Q7RTT6 188 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 ZNF679Q8IYX0 411 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 OR8B12Q8NGG6 310 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 RFKQ969G6 155 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 SGK3Q96BR1 496 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 REEP6Q96HR9 211 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 PGAM5Q96HS1 289 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 MEGF10Q96KG7 1140 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 RDH12Q96NR8 316 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 MROQ9BYG7 248 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 OR10A2Q9H208 303 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 SP140LQ9H930 580 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 TMEM100Q9NV29 134 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 DCAF16Q9NXF7 216 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 SMPD3Q9NY59 655 aaPredicted RBP13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 IKZF2Q9UKS7 526 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 HIVEP2P31629 2446 aa13.54□□□□□ -0.24
ERGIC3-216ENST00000488384 LOC100130705A0A1B0GUX0 176 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 ZNF670-ZNF695F2Z2N8 137 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 F5H5P2 479 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 PHYHO14832 338 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 MAGEB4O15481 346 aaPredicted RBP13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 ZNF254O75437 659 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 ZNF16P17020 682 aaPredicted RBP13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 TNFRSF1AP19438 455 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 MMP16P51512 607 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 FAM3AP98173 230 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 MFGE8Q08431 387 aaPredicted RBP13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 OCLNQ16625 522 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 GFOD2Q3B7J2 385 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 AVPI1Q5T686 147 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 ENTHD1Q8IYW4 607 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 GALNT4Q8N4A0 578 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 CCL17Q92583 94 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 TBX5Q99593 518 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 SOX7Q9BT81 388 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 RGCCQ9H4X1 137 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 NARFLQ9H6Q4 476 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 FAM118AQ9NWS6 357 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 FAM206AQ9NX38 181 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 MRPL15Q9P015 296 aaKnown RBP13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 AASSQ9UDR5 926 aa13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.53□□□□□ -0.24
ERGIC3-216ENST00000488384 SONP18583 2426 aaKnown RBP13.52□□□□□ -0.24
ERGIC3-216ENST00000488384 CASQ2O14958 399 aaPredicted RBP13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 SLC16A6O15403 523 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 SRSF10O75494 262 aaKnown RBP13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 CA6P23280 308 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 DCTDP32321 178 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 RIDAP52758 137 aaKnown RBP13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 ELF3P78545 371 aaPredicted RBP13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 MVKQ03426 396 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 EGR3Q06889 387 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 OR8B8Q15620 311 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 C6orf52Q5T4I8 152 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 MEDAGQ5VYS4 303 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 PACRGLQ8N7B6 248 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 CLDND2Q8NHS1 167 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 DVL3Q92997 716 aaPredicted RBP13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 LYZL4Q96KX0 146 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 APOL4Q9BPW4 351 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 ADAT1Q9BUB4 502 aaKnown RBP13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 GCM1Q9NP62 436 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 TMEM106BQ9NUM4 274 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 MRM2Q9UI43 246 aaKnown RBP13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 WIPI2Q9Y4P8 454 aa13.52□□□□□ -0.25
ERGIC3-216ENST00000488384 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.52□□□□□ -0.253e-7■□□□□ 10.8
ERGIC3-216ENST00000488384 DYSFO75923 2080 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 IGHV3-64DA0A0J9YX35 117 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 TMEM269A0A1B0GVZ9 245 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 A0A1W2PQL4 384 aaPredicted RBP13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 OR2T7P0C7T2 308 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 CFL1P23528 166 aaKnown RBP13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 MTNR1AP48039 350 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 SRP9P49458 86 aaKnown RBP13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 GSK3AP49840 483 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 GZMKP49863 264 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 MAB21L1Q13394 359 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 ZNF829Q3KNS6 432 aaPredicted RBP13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 OGFRL1Q5TC84 451 aaPredicted RBP13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 PLEKHG7Q6ZR37 379 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 OR10H4Q8NGA5 316 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 OR2T27Q8NH04 317 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 RHOXF1Q8NHV9 184 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 HPS1Q92902 700 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 RNFT2Q96EX2 444 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 TIMD4Q96H15 378 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 SIGLEC11Q96RL6 698 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 SLC22A4Q9H015 551 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 C8orf4Q9NR00 106 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 PPP1R3CQ9UQK1 317 aa13.51□□□□□ -0.25
ERGIC3-216ENST00000488384 ACOD1A6NK06 481 aa13.5□□□□□ -0.25
ERGIC3-216ENST00000488384 INAFM1C9JVW0 142 aa13.5□□□□□ -0.25
ERGIC3-216ENST00000488384 MPZL2O60487 215 aa13.5□□□□□ -0.25
ERGIC3-216ENST00000488384 PNPP00491 289 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms