RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 RNF7Q9UBF6 113 aa7.09□□□□□ -1.27
PRKCB-208ENST00000487674 CTSZQ9UBR2 303 aa7.09□□□□□ -1.27
PRKCB-208ENST00000487674 POMT1Q9Y6A1 747 aa7.09□□□□□ -1.27
PRKCB-208ENST00000487674 WNK1Q9H4A3 2382 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 NOTCH1P46531 2555 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 TRAV38-1A0A0B4J264 116 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 OR6C68A6NDL8 312 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 CD300LBA8K4G0 201 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 ADARB2-AS1A8MUL3 147 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 NDUFA2O43678 99 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 OR10H3O60404 316 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 GMDSO60547 372 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 TOX4O94842 621 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 MELTFP08582 738 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 MMP9P14780 707 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 CA6P23280 308 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 OTX1P32242 354 aaPredicted RBP7.08□□□□□ -1.28
PRKCB-208ENST00000487674 IFNGR2P38484 337 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 DBPQ10586 325 aaPredicted RBP7.08□□□□□ -1.28
PRKCB-208ENST00000487674 OR8B8Q15620 311 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 SNAI3Q3KNW1 292 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 MIDNQ504T8 468 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 METTL11BQ5VVY1 283 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 RUSC1-AS1Q66K80 236 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 OLFML2AQ68BL7 652 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 PNLDC1Q8NA58 520 aaKnown RBP7.08□□□□□ -1.28
PRKCB-208ENST00000487674 OR4C15Q8NGM1 316 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 SSMEM1Q8WWF3 244 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 GATAD2BQ8WXI9 593 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 CMTM5Q96DZ9 223 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 MAP6Q96JE9 813 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 WDFY2Q96P53 400 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 TBX15Q96SF7 602 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 CHIAQ9BZP6 476 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 OPA3Q9H6K4 179 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 GORASP2Q9H8Y8 452 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 SMURF1Q9HCE7 757 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 MRPL22Q9NWU5 206 aaKnown RBP7.08□□□□□ -1.28
PRKCB-208ENST00000487674 C1RLQ9NZP8 487 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 MRPL15Q9P015 296 aaKnown RBP7.08□□□□□ -1.28
PRKCB-208ENST00000487674 ERVK-18Q9QC07 812 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 V9GYQ6 96 aa7.08□□□□□ -1.28
PRKCB-208ENST00000487674 TGP01266 2768 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 IGHV1-69DA0A0B4J2H0 117 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.07□□□□□ -1.28
PRKCB-208ENST00000487674 CENPVL3A0A0U1RRI6 287 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 CLPSL1A2RUU4 121 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 OOEPA6NGQ2 149 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 GGT3PA6NGU5 568 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 ADAM20O43506 726 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 IGHV1-69P01742 117 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 ZNF823P16415 610 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 PRDX6P30041 224 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 GSSP48637 474 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 HOXA4Q00056 320 aaPredicted RBP7.07□□□□□ -1.28
PRKCB-208ENST00000487674 ZNF92Q03936 586 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.07□□□□□ -1.28
PRKCB-208ENST00000487674 MZT1Q08AG7 82 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 TSPAN31Q12999 210 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 PDCD1Q15116 288 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 GLYATL3Q5SZD4 288 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 SFRP4Q6FHJ7 346 aaPredicted RBP7.07□□□□□ -1.28
PRKCB-208ENST00000487674 RPL13AP3Q6NVV1 102 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 DRAM2Q6UX65 266 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 NAA40Q86UY6 237 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 KIR3DL3Q8N743 410 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 RNF148Q8N7C7 305 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 BOLLQ8N9W6 283 aaKnown RBP7.07□□□□□ -1.28
PRKCB-208ENST00000487674 SPERTQ8NA61 448 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 PROKR2Q8NFJ6 384 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 OR52L1Q8NGH7 329 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 OR2T4Q8NH00 348 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 OR2AE1Q8NHA4 323 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 DYRK2Q92630 601 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 MCUR1Q96AQ8 359 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 PYURFQ96I23 114 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 CITED1Q99966 193 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 COPS4Q9BT78 406 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 TRIM15Q9C019 465 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 NSRP1Q9H0G5 558 aaKnown RBP7.07□□□□□ -1.28
PRKCB-208ENST00000487674 SIRPDQ9H106 197 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 TNFRSF19Q9NS68 423 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 ACOXLQ9NUZ1 547 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 C14orf119Q9NWQ9 140 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 C1orf123Q9NWV4 160 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 ADA2Q9NZK5 511 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 MAGEL2Q9UJ55 1249 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 CDH10Q9Y6N8 788 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 COMMD3-BMI1R4GMX3 469 aa7.07□□□□□ -1.28
PRKCB-208ENST00000487674 hCG_1807616A0A1W2PRN6 198 aa7.06□□□□□ -1.28
PRKCB-208ENST00000487674 A6NLC8 198 aa7.06□□□□□ -1.28
PRKCB-208ENST00000487674 M0QZ24 198 aa7.06□□□□□ -1.28
PRKCB-208ENST00000487674 BHLHE40O14503 412 aa7.06□□□□□ -1.28
PRKCB-208ENST00000487674 TIMM23O14925 209 aa7.06□□□□□ -1.28
PRKCB-208ENST00000487674 ECDO95905 644 aaPredicted RBP7.06□□□□□ -1.28
PRKCB-208ENST00000487674 FABP3P05413 133 aa7.06□□□□□ -1.28
PRKCB-208ENST00000487674 PSKH1P11801 424 aa7.06□□□□□ -1.28
PRKCB-208ENST00000487674 HSD17B1P14061 328 aa7.06□□□□□ -1.28
PRKCB-208ENST00000487674 ANOS1P23352 680 aa7.06□□□□□ -1.28
PRKCB-208ENST00000487674 RRM2P31350 389 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms