RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 RGS6P49758 472 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 MMP15P51511 669 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 NUDT6P53370 316 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 RPS23P62266 143 aaKnown RBP4.89□□□□□ -1.63
VPS36-202ENST00000462289 MRPS11P82912 194 aaKnown RBP4.89□□□□□ -1.63
VPS36-202ENST00000462289 SNTB2Q13425 540 aaKnown RBP4.89□□□□□ -1.63
VPS36-202ENST00000462289 SNAPC1Q16533 368 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 TBC1D28Q2M2D7 210 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 LPCAT4Q643R3 524 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 CORO6Q6QEF8 472 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 SLC22A25Q6T423 547 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 DRAM2Q6UX65 266 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 MEPCEQ7L2J0 689 aaKnown RBP4.89□□□□□ -1.63
VPS36-202ENST00000462289 SHFQ7M4L6 423 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 SLC16A9Q7RTY1 509 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 DPY19L4Q7Z388 723 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 TMEM200AQ86VY9 491 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 GID4Q8IVV7 300 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 ENTHD1Q8IYW4 607 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 MUC15Q8N387 334 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 TCEANCQ8N8B7 351 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 ICA1LQ8NDH6 482 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 PROKR2Q8NFJ6 384 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 AKR7LQ8NHP1 331 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 RPS4Y2Q8TD47 263 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 TFAP2CQ92754 450 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 C4orf45Q96LM5 186 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 COG8Q96MW5 612 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 ZNF582Q96NG8 517 aaPredicted RBP4.89□□□□□ -1.63
VPS36-202ENST00000462289 CLUHP3Q96NS8 147 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 SIGLEC11Q96RL6 698 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 INTS14Q96SY0 518 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 ATF6BQ99941 703 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 ABHD6Q9BV23 337 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 MRPL37Q9BZE1 423 aaKnown RBP4.89□□□□□ -1.63
VPS36-202ENST00000462289 CCNB1IP1Q9NPC3 277 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 FAIMQ9NVQ4 179 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 SMPD3Q9NY59 655 aaPredicted RBP4.89□□□□□ -1.63
VPS36-202ENST00000462289 TVP23BQ9NYZ1 205 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 KIF17Q9P2E2 1029 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 WARS2Q9UGM6 360 aaKnown RBP4.89□□□□□ -1.63
VPS36-202ENST00000462289 EDARQ9UNE0 448 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 EXOGQ9Y2C4 368 aaKnown RBP4.89□□□□□ -1.63
VPS36-202ENST00000462289 PLEKHA6Q9Y2H5 1048 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 KLHDC2Q9Y2U9 406 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 HSPE1-MOB4S4R3N1 261 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 SETD2Q9BYW2 2564 aaPredicted RBP4.89□□□□□ -1.63
VPS36-202ENST00000462289 WNK2Q9Y3S1 2297 aa4.89□□□□□ -1.63
VPS36-202ENST00000462289 FN1P02751 2386 aaKnown RBP4.89□□□□□ -1.63
VPS36-202ENST00000462289 MXRA5Q9NR99 2828 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 LOC100130705A0A1B0GUX0 176 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 C5orf49A4QMS7 147 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 TVP23AA6NH52 213 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 ACOD1A6NK06 481 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 FAM171A2A8MVW0 826 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 VWC2LB2RUY7 222 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 ZNF878C9JN71 531 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 M0R129 80 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 TLX2O43763 284 aaPredicted RBP4.88□□□□□ -1.63
VPS36-202ENST00000462289 MPZL2O60487 215 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 SELENOFO60613 162 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 FSTL3O95633 263 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 OR4A8P0C604 315 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 CCL2P13500 99 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 POU1F1P28069 291 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 APLNRP35414 380 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 RPS27P42677 84 aaKnown RBP4.88□□□□□ -1.63
VPS36-202ENST00000462289 GUCA1AP43080 201 aaPredicted RBP4.88□□□□□ -1.63
VPS36-202ENST00000462289 RAD52P43351 418 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 HTR5AP47898 357 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 PTH2RP49190 550 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 GDI2P50395 445 aaKnown RBP4.88□□□□□ -1.63
VPS36-202ENST00000462289 CDC42P60953 191 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 ERVS71-1P61550 626 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 SLC34A1Q06495 639 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 TNK1Q13470 666 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 IL18R1Q13478 541 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 APOFQ13790 326 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 KLHL12Q53G59 568 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 ZNF691Q5VV52 312 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 AGAP6Q5VW22 663 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 MEDAGQ5VYS4 303 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 OTPQ5XKR4 325 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 DCXRQ7Z4W1 244 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 BCDIN3DQ7Z5W3 292 aaKnown RBP4.88□□□□□ -1.63
VPS36-202ENST00000462289 LINC00346Q8IVM7 164 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 LILRB2Q8N423 598 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 RFLNBQ8N5W9 214 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 ZNF485Q8NCK3 441 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 OR10H5Q8NGA6 315 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 OR51L1Q8NGJ5 315 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 KLF14Q8TD94 323 aaPredicted RBP4.88□□□□□ -1.63
VPS36-202ENST00000462289 SLC7A6Q92536 515 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 STMN2Q93045 179 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 APOBEC3DQ96AK3 386 aaPredicted RBP4.88□□□□□ -1.63
VPS36-202ENST00000462289 HAVCR1Q96D42 359 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 SLAMF6Q96DU3 332 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 ZMYND19Q96E35 227 aaPredicted RBP4.88□□□□□ -1.63
VPS36-202ENST00000462289 FOXN4Q96NZ1 517 aa4.88□□□□□ -1.63
VPS36-202ENST00000462289 OR8B4Q96RC9 309 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms