RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 HSD11B1P28845 292 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 GRB2P62993 217 aaKnown RBP10.78□□□□□ -0.68
CHD3-206ENST00000452447 MZT1Q08AG7 82 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 MPPED2Q15777 294 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 ZSCAN26Q16670 478 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 GLYATL3Q5SZD4 288 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 DCDC5Q6ZRR9 648 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 SPATC1Q76KD6 591 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 INTS14Q96SY0 518 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 OPA3Q9H6K4 179 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 MRPL15Q9P015 296 aaKnown RBP10.78□□□□□ -0.68
CHD3-206ENST00000452447 RNF7Q9UBF6 113 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 CLN8Q9UBY8 286 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.77□□□□□ -0.68
CHD3-206ENST00000452447 DHRS12A0PJE2 317 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 FAM183AA6NL82 134 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 XRCC2O43543 280 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 APOC1P02654 83 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 CD80P33681 288 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 PITPNBP48739 271 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 PAX8Q06710 450 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 EIF2B1Q14232 305 aaKnown RBP10.77□□□□□ -0.68
CHD3-206ENST00000452447 KCNJ8Q15842 424 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 DPY19L4Q7Z388 723 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 ERI1Q8IV48 349 aaKnown RBP10.77□□□□□ -0.68
CHD3-206ENST00000452447 IQCF1Q8N6M8 205 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 SIGLECL1Q8N7X8 197 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 C3orf56Q8N813 242 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 ZDHHC22Q8N966 263 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 SPERTQ8NA61 448 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 PLPP7Q8NBV4 271 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 OR6N2Q8NGY6 317 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 RAB40AQ8WXH6 277 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 MS4A7Q9GZW8 240 aaPredicted RBP10.77□□□□□ -0.68
CHD3-206ENST00000452447 TOR3AQ9H497 397 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 SP140LQ9H930 580 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 ESM1Q9NQ30 184 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 PDP1Q9P0J1 537 aaPredicted RBP10.77□□□□□ -0.68
CHD3-206ENST00000452447 ZNF69Q9UC07 566 aa10.77□□□□□ -0.68
CHD3-206ENST00000452447 IGHV2-70DA0A0C4DH43 119 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 TMEM89A2RUT3 159 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 ARRDC5A6NEK1 342 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 AQP12BA6NM10 295 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 ACOT8O14734 319 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 TBX1O43435 398 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 E2F6O75461 281 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 ANXA2P07355 339 aaKnown RBP10.77□□□□□ -0.69
CHD3-206ENST00000452447 PPIAL4GP0DN37 164 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 HOXB6P17509 224 aaKnown RBP10.77□□□□□ -0.69
CHD3-206ENST00000452447 CFPP27918 469 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 POU1F1P28069 291 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 GSTT1P30711 240 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 GRK5P34947 590 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 DDOSTP39656 456 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 CX3CR1P49238 355 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 COMPP49747 757 aaPredicted RBP10.77□□□□□ -0.69
CHD3-206ENST00000452447 TIGD6Q17RP2 521 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 KLF17Q5JT82 389 aaPredicted RBP10.77□□□□□ -0.69
CHD3-206ENST00000452447 LINC01590Q5TEZ4 76 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 AQP12AQ8IXF9 295 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 ADGRG5Q8IZF4 528 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 BOLLQ8N9W6 283 aaKnown RBP10.77□□□□□ -0.69
CHD3-206ENST00000452447 C19orf18Q8NEA5 215 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 OR56B2PQ8NGI1 322 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 CANT1Q8WVQ1 401 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 MMADHCQ9H3L0 296 aaPredicted RBP10.77□□□□□ -0.69
CHD3-206ENST00000452447 MED20Q9H944 212 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 ZNF556Q9HAH1 456 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 C14orf119Q9NWQ9 140 aa10.77□□□□□ -0.69
CHD3-206ENST00000452447 KIR2DS1A0A191URI9 304 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 C5orf63A6NC05 138 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 A6NLC8 198 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 ANKRD30BLA7E2S9 258 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 PHYHO14832 338 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 GYG2O15488 501 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 GLCEO94923 617 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 PTBP3O95758 552 aaKnown RBP10.76□□□□□ -0.69
CHD3-206ENST00000452447 GRPP07492 148 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 ANOS1P23352 680 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 UBA52P62987 128 aaKnown RBP10.76□□□□□ -0.69
CHD3-206ENST00000452447 PAX2Q02962 417 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 OR8B8Q15620 311 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 DNAL1Q4LDG9 190 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 WDR25Q64LD2 544 aaPredicted RBP10.76□□□□□ -0.69
CHD3-206ENST00000452447 SFRP4Q6FHJ7 346 aaPredicted RBP10.76□□□□□ -0.69
CHD3-206ENST00000452447 LYPD2Q6UXB3 125 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 DOK3Q7L591 496 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 SHFQ7M4L6 423 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 PARP8Q8N3A8 854 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 OR52H1Q8NGJ2 320 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 OR8S1Q8NH09 359 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 NUDT16L1Q9BRJ7 211 aaKnown RBP10.76□□□□□ -0.69
CHD3-206ENST00000452447 ABHD6Q9BV23 337 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 OR51V1Q9H2C8 321 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 TRIM36Q9NQ86 728 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 C1orf123Q9NWV4 160 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 DNAJC27Q9NZQ0 273 aa10.76□□□□□ -0.69
CHD3-206ENST00000452447 hCG_1807616A0A1W2PRN6 198 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 PRR23D1E9PI22 279 aaPredicted RBP10.75□□□□□ -0.69
CHD3-206ENST00000452447 C3orf80F5H4A9 247 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms