RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ZNF878C9JN71 531 aa21.18■□□□□ 0.98
VEGFA-208ENST00000417285 OR8G1Q15617 311 aa21.18■□□□□ 0.98
VEGFA-208ENST00000417285 DCDC5Q6ZRR9 648 aa21.18■□□□□ 0.98
VEGFA-208ENST00000417285 SIGLECL1Q8N7X8 197 aa21.18■□□□□ 0.98
VEGFA-208ENST00000417285 SPERTQ8NA61 448 aa21.18■□□□□ 0.98
VEGFA-208ENST00000417285 OPA3Q9H6K4 179 aa21.18■□□□□ 0.98
VEGFA-208ENST00000417285 YY1AP1Q9H869 796 aa21.18■□□□□ 0.98
VEGFA-208ENST00000417285 FN3KRPQ9HA64 309 aa21.18■□□□□ 0.98
VEGFA-208ENST00000417285 MRPL15Q9P015 296 aaKnown RBP21.18■□□□□ 0.98
VEGFA-208ENST00000417285 PDP1Q9P0J1 537 aaPredicted RBP21.18■□□□□ 0.98
VEGFA-208ENST00000417285 KIR2DS1A0A191URI9 304 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 GGT3PA6NGU5 568 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 E2F6O75461 281 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 CA6P23280 308 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 SLC15A1P46059 708 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 PITPNBP48739 271 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 PRKXP51817 358 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 ZNF92Q03936 586 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 FLOT2Q14254 428 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 KCNJ8Q15842 424 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 SPATA24Q86W54 205 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 IQCF1Q8N6M8 205 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 OTULINQ96BN8 352 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 ZNF556Q9HAH1 456 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 FAM53CQ9NYF3 392 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 CLN8Q9UBY8 286 aa21.17■□□□□ 0.98
VEGFA-208ENST00000417285 IGHV2-70DA0A0C4DH43 119 aa21.16■□□□□ 0.98
VEGFA-208ENST00000417285 PAICSP22234 425 aaKnown RBP21.16■□□□□ 0.98
VEGFA-208ENST00000417285 PRTN3P24158 256 aa21.16■□□□□ 0.98
VEGFA-208ENST00000417285 GRB2P62993 217 aaKnown RBP21.16■□□□□ 0.98
VEGFA-208ENST00000417285 MZT1Q08AG7 82 aa21.16■□□□□ 0.98
VEGFA-208ENST00000417285 GLYATL3Q5SZD4 288 aa21.16■□□□□ 0.98
VEGFA-208ENST00000417285 LINC01590Q5TEZ4 76 aa21.16■□□□□ 0.98
VEGFA-208ENST00000417285 OR2AE1Q8NHA4 323 aa21.16■□□□□ 0.98
VEGFA-208ENST00000417285 INTS14Q96SY0 518 aa21.16■□□□□ 0.98
VEGFA-208ENST00000417285 MS4A7Q9GZW8 240 aaPredicted RBP21.16■□□□□ 0.98
VEGFA-208ENST00000417285 RNF7Q9UBF6 113 aa21.16■□□□□ 0.98
VEGFA-208ENST00000417285 FAM183AA6NL82 134 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 PTBP3O95758 552 aaKnown RBP21.15■□□□□ 0.98
VEGFA-208ENST00000417285 POU1F1P28069 291 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 GSTT1P30711 240 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 MTNR1AP48039 350 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 EIF2B1Q14232 305 aaKnown RBP21.15■□□□□ 0.98
VEGFA-208ENST00000417285 FAM201AQ5SY85 155 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 TMEM179BQ7Z7N9 219 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 ERI1Q8IV48 349 aaKnown RBP21.15■□□□□ 0.98
VEGFA-208ENST00000417285 OR6N2Q8NGY6 317 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 UPRTQ96BW1 309 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 ADAT1Q9BUB4 502 aaKnown RBP21.15■□□□□ 0.98
VEGFA-208ENST00000417285 TOR3AQ9H497 397 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 SP140LQ9H930 580 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 MED20Q9H944 212 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 UFSP2Q9NUQ7 469 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 N6AMT1Q9Y5N5 214 aa21.15■□□□□ 0.98
VEGFA-208ENST00000417285 PHYHO14832 338 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 XRCC2O43543 280 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 FAM20BO75063 409 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 GLCEO94923 617 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 HSD11B1P28845 292 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 DDOSTP39656 456 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 NPY4RP50391 375 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 FOXL1Q12952 345 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 BAMBIQ13145 260 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 MPPED2Q15777 294 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 C9orf139Q6ZV77 190 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 SPATC1Q76KD6 591 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 SHFQ7M4L6 423 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 DPY19L4Q7Z388 723 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 SGMS2Q8NHU3 365 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 DACT3Q96B18 629 aaPredicted RBP21.14■□□□□ 0.97
VEGFA-208ENST00000417285 TRIM36Q9NQ86 728 aa21.14■□□□□ 0.97
VEGFA-208ENST00000417285 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.13■□□□□ 0.97
VEGFA-208ENST00000417285 NDUFA2O43678 99 aa21.13■□□□□ 0.97
VEGFA-208ENST00000417285 DNAJC8O75937 253 aaPredicted RBP21.13■□□□□ 0.97
VEGFA-208ENST00000417285 APOC1P02654 83 aa21.13■□□□□ 0.97
VEGFA-208ENST00000417285 SLC2A1P11166 492 aa21.13■□□□□ 0.97
VEGFA-208ENST00000417285 OSMP13725 252 aa21.13■□□□□ 0.97
VEGFA-208ENST00000417285 CBX1P83916 185 aa21.13■□□□□ 0.97
VEGFA-208ENST00000417285 GINS1Q14691 196 aa21.13■□□□□ 0.97
VEGFA-208ENST00000417285 PRAMEF6Q5VXH4 476 aa21.13■□□□□ 0.97
VEGFA-208ENST00000417285 CD276Q5ZPR3 534 aa21.13■□□□□ 0.97
VEGFA-208ENST00000417285 WDR25Q64LD2 544 aaPredicted RBP21.13■□□□□ 0.97
VEGFA-208ENST00000417285 BCL6BQ8N143 479 aaPredicted RBP21.13■□□□□ 0.97
VEGFA-208ENST00000417285 SLC7A6OSQ96CW6 309 aaPredicted RBP21.13■□□□□ 0.97
VEGFA-208ENST00000417285 NUDT16L1Q9BRJ7 211 aaKnown RBP21.13■□□□□ 0.97
VEGFA-208ENST00000417285 OR51V1Q9H2C8 321 aa21.13■□□□□ 0.97
VEGFA-208ENST00000417285 MGAM2Q2M2H8 2515 aa21.12■□□□□ 0.97
VEGFA-208ENST00000417285 PRR23D1E9PI22 279 aaPredicted RBP21.12■□□□□ 0.97
VEGFA-208ENST00000417285 LGALS8O00214 317 aa21.12■□□□□ 0.97
VEGFA-208ENST00000417285 FKBP6O75344 327 aa21.12■□□□□ 0.97
VEGFA-208ENST00000417285 HMGN1P05114 100 aa21.12■□□□□ 0.97
VEGFA-208ENST00000417285 PRR23D2P0DMB1 279 aaPredicted RBP21.12■□□□□ 0.97
VEGFA-208ENST00000417285 HKR1P10072 659 aa21.12■□□□□ 0.97
VEGFA-208ENST00000417285 ANXA8P13928 327 aa21.12■□□□□ 0.97
VEGFA-208ENST00000417285 PSMB10P40306 273 aa21.12■□□□□ 0.97
VEGFA-208ENST00000417285 CX3CR1P49238 355 aa21.12■□□□□ 0.97
VEGFA-208ENST00000417285 AWAT1Q58HT5 328 aa21.12■□□□□ 0.97
VEGFA-208ENST00000417285 LYPD2Q6UXB3 125 aa21.12■□□□□ 0.97
VEGFA-208ENST00000417285 RHOUQ7L0Q8 258 aa21.12■□□□□ 0.97
VEGFA-208ENST00000417285 PARP8Q8N3A8 854 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms