RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 ZNF430Q9H8G1 570 aaPredicted RBP4.9□□□□□ -1.63
CBX1P3-201ENST00000413296 MEPEQ9NQ76 525 aaPredicted RBP4.9□□□□□ -1.63
CBX1P3-201ENST00000413296 AURKAIP1Q9NWT8 199 aaPredicted RBP4.9□□□□□ -1.63
CBX1P3-201ENST00000413296 ZNF391Q9UJN7 358 aa4.9□□□□□ -1.63
CBX1P3-201ENST00000413296 NDRG2Q9UN36 371 aaKnown RBP4.9□□□□□ -1.63
CBX1P3-201ENST00000413296 NDUFAF1Q9Y375 327 aa4.9□□□□□ -1.63
CBX1P3-201ENST00000413296 CPQQ9Y646 472 aa4.9□□□□□ -1.63
CBX1P3-201ENST00000413296 KCPQ6ZWJ8 1503 aa4.9□□□□□ -1.63
CBX1P3-201ENST00000413296 QRICH2Q9H0J4 1663 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 WDR90Q96KV7 1748 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 ISPDA4D126 451 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 ZNF724A8MTY0 619 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 SMKR1H3BMG3 65 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 ZNF593O00488 134 aaPredicted RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 LAD1O00515 517 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 UBDO15205 165 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 SURF4O15260 269 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 FABP7O15540 132 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 SYNGR1O43759 233 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 HOXC4P09017 264 aaPredicted RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 LINC00271P0C7V0 271 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 SLC2A2P11168 524 aaPredicted RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 ZNF12P17014 697 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 GRPRP30550 384 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 RPA3P35244 121 aaPredicted RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 PMELP40967 661 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 PTGDSP41222 190 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 GLP1RP43220 463 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 KIR2DS4P43632 304 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 PPOXP50336 477 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 FGF8P55075 233 aaPredicted RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 RPL24P83731 157 aaKnown RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 BCL2L1Q07817 233 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 TPTE2P1Q5T6R2 138 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 FAM27D1Q5T7N8 215 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 TMEM42Q69YG0 159 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 AMIGO2Q86SJ2 522 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 ISCA2Q86U28 154 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 PIM3Q86V86 326 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 CLVS1Q8IUQ0 354 aaPredicted RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 LACC1Q8IV20 430 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 RBMXL3Q8N7X1 1067 aaKnown RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 OR10W1Q8NGF6 305 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 OR2T11Q8NH01 316 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 C16orf78Q8WTQ4 265 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 RERGQ96A58 199 aaPredicted RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 RCN3Q96D15 328 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 CMTM7Q96FZ5 175 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 C2orf48Q96LS8 159 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 ZNF597Q96LX8 424 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 ZNF599Q96NL3 588 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 SORCS2Q96PQ0 1159 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 OR2V2Q96R30 315 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 ZNF2Q9BSG1 426 aaPredicted RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 DUSP26Q9BV47 211 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 CSTL1Q9H114 145 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 ELL3Q9HB65 397 aaPredicted RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 ADGRL4Q9HBW9 690 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 MYOZ1Q9NP98 299 aaPredicted RBP4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 ZNF224Q9NZL3 707 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 CIDEBQ9UHD4 219 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 CES1P1Q9UKY3 287 aa4.89□□□□□ -1.63
CBX1P3-201ENST00000413296 TNRC18O15417 2968 aaPredicted RBP4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 CICQ96RK0 1608 aaPredicted RBP4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 SMIM9A6NGZ8 99 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 SULT2B1O00204 365 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 RFXAPO00287 272 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 NME4O00746 187 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 ADAM10O14672 748 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 ZNF749O43361 778 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 TYROBPO43914 113 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 DPM1O60762 260 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 ZNF623O75123 536 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 CD8AP01732 235 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 MT-ND4P03905 459 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 NBEAP1P0C6P0 100 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 HLA-DOBP13765 273 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 GTF2F2P13984 249 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 RAB5AP20339 215 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 BCL3P20749 454 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 GPR183P32249 361 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 HRH1P35367 487 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 RAB7AP51149 207 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 CRYBA4P53673 196 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 SEMG2Q02383 582 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 DOC2BQ14184 412 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 TRIP6Q15654 476 aaKnown RBP4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 SLC1A5Q15758 541 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 ZIC1Q15915 447 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 VMACQ2NL98 169 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 VAX1Q5SQQ9 334 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 C1orf146Q5VVC0 180 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 APOOLQ6UXV4 268 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 NIT1Q86X76 327 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 C10orf107Q8IVU9 208 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 CPNE9Q8IYJ1 553 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 METTL13Q8N6R0 699 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 OR52B6Q8NGF0 335 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 SPATA3Q8NHX4 192 aa4.88□□□□□ -1.63
CBX1P3-201ENST00000413296 C11orf45Q8TAV5 145 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms