RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 SPTBN4Q9H254 2564 aa13.11□□□□□ -0.31
MKS1-202ENST00000393119 PDCD5O14737 125 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 ORC5O43913 435 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 SCO1O75880 301 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 SYNGR4O95473 234 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 CCL2P13500 99 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 IGFBP3P17936 291 aaPredicted RBP13.1□□□□□ -0.31
MKS1-202ENST00000393119 TALDO1P37837 337 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 EIF2S3P41091 472 aaKnown RBP13.1□□□□□ -0.31
MKS1-202ENST00000393119 PITPNBP48739 271 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 BTG1P62324 171 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 PDSS1Q5T2R2 415 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 FAM27BQ5VT28 67 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 TMEM65Q6PI78 240 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 GCNT2Q8N0V5 402 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 ZNF680Q8NEM1 530 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 OR13C9Q8NGT0 318 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 AKAP1Q92667 903 aaKnown RBP eCLIP13.1□□□□□ -0.31
MKS1-202ENST00000393119 CREB3L1Q96BA8 519 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 ZNF275Q9NSD4 429 aaPredicted RBP13.1□□□□□ -0.31
MKS1-202ENST00000393119 ABRACLQ9P1F3 81 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 RCE1Q9Y256 329 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 RELNP78509 3460 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 GFRA3O60609 400 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 RAF1P04049 648 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 ISG15P05161 165 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 MRPS34P82930 218 aaKnown RBP13.1□□□□□ -0.31
MKS1-202ENST00000393119 PSG4Q00888 419 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 GLYATL3Q5SZD4 288 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 PXDC1Q5TGL8 231 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 IGFL2Q6UWQ7 119 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 SLC22A24Q8N4F4 322 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 GJC3Q8NFK1 279 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 OR52N4Q8NGI2 321 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 HAVCR2Q8TDQ0 301 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 PNPLA2Q96AD5 504 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 CCDC120Q96HB5 630 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 HDHD2Q9H0R4 259 aa13.1□□□□□ -0.31
MKS1-202ENST00000393119 MAP1BP46821 2468 aaKnown RBP13.09□□□□□ -0.31
MKS1-202ENST00000393119 KDM4BO94953 1096 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 TPOP07202 933 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 ACHEP22303 614 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 ARF1P84077 181 aaKnown RBP13.09□□□□□ -0.31
MKS1-202ENST00000393119 ELFN2Q5R3F8 820 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 TRIQKQ629K1 86 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 ZNF813Q6ZN06 617 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 ZNF704Q6ZNC4 412 aaPredicted RBP13.09□□□□□ -0.31
MKS1-202ENST00000393119 JAGN1Q8N5M9 183 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 LHFPL5Q8TAF8 219 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 NPRL2Q8WTW4 380 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 AIFM2Q9BRQ8 373 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 THAP7Q9BT49 309 aaPredicted RBP13.09□□□□□ -0.31
MKS1-202ENST00000393119 SLCO5A1Q9H2Y9 848 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 ZNF224Q9NZL3 707 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 MCTS1Q9ULC4 181 aaKnown RBP13.09□□□□□ -0.31
MKS1-202ENST00000393119 ACACAQ13085 2346 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 FAM240BA0A1B0GVZ2 78 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 C7orf66A4D0T2 115 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 ACOT7O00154 380 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 FABP7O15540 132 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 ZNF250P15622 560 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 HIST1H3AP68431 136 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 C2orf76Q3KRA6 126 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 HIST2H3PS2Q5TEC6 136 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 TMEM244Q5VVB8 128 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 HIST2H3AQ71DI3 136 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 RTN4RL2Q86UN3 420 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 C19orf18Q8NEA5 215 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 OR4D6Q8NGJ1 314 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 INTS12Q96CB8 462 aaKnown RBP13.09□□□□□ -0.31
MKS1-202ENST00000393119 SORCS2Q96PQ0 1159 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 NOX3Q9HBY0 568 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 ADAM30Q9UKF2 790 aa13.09□□□□□ -0.31
MKS1-202ENST00000393119 IGKV3D-15A0A087WSY6 115 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 LINC01387J3KSC0 135 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 HLA-HP01893 362 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 UBCP0CG48 685 aaKnown RBP13.08□□□□□ -0.32
MKS1-202ENST00000393119 CDK2P24941 298 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 SLC6A1P30531 599 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 POU3F4P49335 361 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 PLA1AQ53H76 456 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 ZNF57Q68EA5 555 aaPredicted RBP13.08□□□□□ -0.32
MKS1-202ENST00000393119 CHMP1BQ7LBR1 199 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 SLC16A14Q7RTX9 510 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 OR8H1Q8NGG4 311 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 CPT1CQ8TCG5 803 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 SLC25A28Q96A46 364 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 PGAM5Q96HS1 289 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
MKS1-202ENST00000393119 STEAP1Q9UHE8 339 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 INMT-MINDY4F8WBC2 141 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 SGCEO43556 437 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 CD2P06729 351 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 UBE2NLQ5JXB2 153 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 CPEB3Q8NE35 698 aaKnown RBP13.08□□□□□ -0.32
MKS1-202ENST00000393119 WNT5BQ9H1J7 359 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 PTTG3PQ9NZH4 202 aa13.08□□□□□ -0.32
MKS1-202ENST00000393119 M0R135 149 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 SYNGR3O43761 229 aa13.07□□□□□ -0.32
MKS1-202ENST00000393119 KRT74Q7RTS7 529 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms