RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PTHLHP12272 177 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 ANXA7P20073 488 aaKnown RBP12.92□□□□□ -0.34
TCOF1-202ENST00000377797 DCTDP32321 178 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 MAMSTRQ6ZN01 415 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 PP6455Q8WZ26 134 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 PRRX2Q99811 253 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 NGBQ9NPG2 151 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 TAS2R5Q9NYW4 299 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 PIGBOS1A0A0B4J2F0 54 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 AQP7P3A6NL99 342 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 MASP2O00187 686 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 DXOO77932 396 aaKnown RBP12.92□□□□□ -0.34
TCOF1-202ENST00000377797 CDC20Q12834 499 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 DYRK1AQ13627 763 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 ZNF774Q6NX45 483 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 DRAM2Q6UX65 266 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 GABRG1Q8N1C3 465 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 GUCD1Q96NT3 240 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 HRASLSQ9HDD0 168 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 DYNLRB1Q9NP97 96 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 TREM1Q9NP99 234 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 MED12Q93074 2177 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 XRCC3O43542 346 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 THY1P04216 161 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 MAGEA5P43359 124 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 NPY4RP50391 375 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 ZNF767PQ75MW2 155 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 SPIN2AQ99865 258 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 SPIN2BQ9BPZ2 258 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 BOLA1Q9Y3E2 137 aa12.92□□□□□ -0.34
TCOF1-202ENST00000377797 IGKV3D-11A0A0A0MRZ8 115 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 SELENOPP49908 381 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 RAB35Q15286 201 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 RNPS1Q15287 305 aaKnown RBP12.91□□□□□ -0.34
TCOF1-202ENST00000377797 OR51A2Q8NGJ7 313 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 APOBEC4Q8WW27 367 aaKnown RBP12.91□□□□□ -0.34
TCOF1-202ENST00000377797 FYTTD1Q96QD9 318 aaKnown RBP12.91□□□□□ -0.34
TCOF1-202ENST00000377797 OR4C45A6NMZ5 311 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 SPDEFO95238 335 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 CD3DP04234 171 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 ANKRD16Q6P6B7 361 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 DCTN6O00399 190 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 CAV2P51636 162 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 INSM1Q01101 510 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-202ENST00000377797 TMEM91Q6ZNR0 172 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 GLCCI1Q86VQ1 547 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 SNX18Q96RF0 628 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 HLA-HP01893 362 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 IL11P20809 199 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 KIR2DL3P43628 341 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 MMP15P51511 669 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 SORDQ00796 357 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 CLVS2Q5SYC1 327 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 TMEM105Q8N8V8 129 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 APCDD1LQ8NCL9 501 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 SECTM1Q8WVN6 248 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 ZC3HAV1LQ96H79 300 aaKnown RBP12.91□□□□□ -0.34
TCOF1-202ENST00000377797 BARHL1Q9BZE3 327 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 RNF32Q9H0A6 362 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 PTTG3PQ9NZH4 202 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 OR5V1Q9UGF6 321 aa12.91□□□□□ -0.34
TCOF1-202ENST00000377797 SIRT4Q9Y6E7 314 aaPredicted RBP12.91□□□□□ -0.34
TCOF1-202ENST00000377797 GDF9O60383 454 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 GNB3P16520 340 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 BCL2A1Q16548 175 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 SLC25A26Q70HW3 274 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 ZNF546Q86UE3 836 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 OR2AE1Q8NHA4 323 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 EMG1Q92979 244 aaKnown RBP12.9□□□□□ -0.34
TCOF1-202ENST00000377797 ENY2Q9NPA8 101 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 ZFP57Q9NU63 452 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 LSM2Q9Y333 95 aaKnown RBP12.9□□□□□ -0.34
TCOF1-202ENST00000377797 AQP8O94778 261 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 MGMTP16455 207 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 EPHA1P21709 976 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 HOXA6P31267 233 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 CD96P40200 585 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 PLXDC2Q6UX71 529 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 TRMT61AQ96FX7 289 aaKnown RBP12.9□□□□□ -0.34
TCOF1-202ENST00000377797 CCDC86Q9H6F5 360 aaKnown RBP12.9□□□□□ -0.34
TCOF1-202ENST00000377797 ANGPTL7O43827 346 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 ACSM4P0C7M7 580 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 OR10AC1Q8NH08 325 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 SF3B5Q9BWJ5 86 aaKnown RBP12.9□□□□□ -0.34
TCOF1-202ENST00000377797 SLA2Q9H6Q3 261 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 MYLKQ15746 1914 aa12.9□□□□□ -0.34
TCOF1-202ENST00000377797 FTH1P19P0C7X4 201 aa12.9□□□□□ -0.35
TCOF1-202ENST00000377797 UQCRC1P31930 480 aa12.9□□□□□ -0.35
TCOF1-202ENST00000377797 PABPC1L2AQ5JQF8 200 aa12.9□□□□□ -0.35
TCOF1-202ENST00000377797 PRSS35Q8N3Z0 413 aa12.9□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF285Q96NJ3 590 aa12.9□□□□□ -0.35
TCOF1-202ENST00000377797 DDA1Q9BW61 102 aa12.9□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF275Q9NSD4 429 aaPredicted RBP12.9□□□□□ -0.35
TCOF1-202ENST00000377797 TAS2R3Q9NYW6 316 aa12.9□□□□□ -0.35
TCOF1-202ENST00000377797 B3GAT1Q9P2W7 334 aa12.9□□□□□ -0.35
TCOF1-202ENST00000377797 FLVCR2Q9UPI3 526 aa12.9□□□□□ -0.35
TCOF1-202ENST00000377797 IGKV1D-42A0A075B6H8 117 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 A0A0J9YW62 118 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 NPIPB9F8W1W9 429 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 SMLR1H3BR10 107 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms