RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.45□□□□□ -0.9
PRDM1-201ENST00000369089 TMEM184AQ6ZMB5 413 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 MEX3BQ6ZN04 569 aaKnown RBP9.45□□□□□ -0.9
PRDM1-201ENST00000369089 GPRIN1Q7Z2K8 1008 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 SELENOHQ8IZQ5 122 aaKnown RBP9.45□□□□□ -0.9
PRDM1-201ENST00000369089 ZNF664Q8N3J9 261 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 CSNK1A1LQ8N752 337 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 HIST1H2BHQ93079 126 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 NEIL2Q969S2 332 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 MRPL38Q96DV4 380 aaKnown RBP9.45□□□□□ -0.9
PRDM1-201ENST00000369089 LRRC3BQ96PB8 259 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 HIST1H2BNQ99877 126 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 HIST1H2BMQ99879 126 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 R3HDMLQ9H3Y0 253 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 RNF186Q9NXI6 227 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 TLCD2A6NGC4 264 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 K7EQM0 130 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 DUS4LO95620 317 aaKnown RBP9.45□□□□□ -0.9
PRDM1-201ENST00000369089 MPIG6BO95866 241 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 ARRB1P49407 418 aaPredicted RBP9.45□□□□□ -0.9
PRDM1-201ENST00000369089 SEMG2Q02383 582 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 TCEA2Q15560 299 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 COX20Q5RI15 118 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 FAM162BQ5T6X4 162 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 LCN15Q6UWW0 184 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 LGI3Q8N145 548 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 ATP5SQ99766 215 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 HINT3Q9NQE9 182 aaKnown RBP9.45□□□□□ -0.9
PRDM1-201ENST00000369089 RNF150Q9ULK6 438 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 PPT2Q9UMR5 302 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 ZNF337Q9Y3M9 751 aa9.45□□□□□ -0.9
PRDM1-201ENST00000369089 NDUFB2O95178 105 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 CCL5P13501 91 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 HLA-DOBP13765 273 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 MDKP21741 143 aaPredicted RBP9.44□□□□□ -0.9
PRDM1-201ENST00000369089 TMEM128Q5BJH2 165 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 C19orf48Q6RUI8 117 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 ADGRE4PQ86SQ3 457 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 OR51A4Q8NGJ6 313 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 ZNF563Q8TA94 476 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 PTPN18Q99952 460 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 HSPB9Q9BQS6 159 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 GPR62Q9BZJ7 368 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 MSL2Q9HCI7 577 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 SRA1Q9HD15 236 aaKnown RBP9.44□□□□□ -0.9
PRDM1-201ENST00000369089 MBNL1Q9NR56 388 aaKnown RBP9.44□□□□□ -0.9
PRDM1-201ENST00000369089 HAO2Q9NYQ3 351 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 LAMTOR2Q9Y2Q5 125 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 STRCQ7RTU9 1775 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 TMEM212A6NML5 194 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 ANKRD66B4E2M5 251 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 PRSS56P0CW18 603 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 PDX1P52945 283 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 CDK5R1Q15078 307 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 HLA-BQ31612 363 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 SLC39A5Q6ZMH5 540 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 SLC35E3Q7Z769 313 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 OR2AJ1Q8NGZ0 328 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 A0A0A6YYC8 382 aaPredicted RBP9.44□□□□□ -0.9
PRDM1-201ENST00000369089 I3L1I5 382 aaPredicted RBP9.44□□□□□ -0.9
PRDM1-201ENST00000369089 M0R2Z0 102 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 CD74P04233 296 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 CYBAP13498 195 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 HOXA6P31267 233 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 LPAR6P43657 344 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 RAB32Q13637 225 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 ITPRIPL2Q3MIP1 535 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 C19orf35Q6ZS72 473 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 COMMD6Q7Z4G1 85 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 ZNF547Q8IVP9 402 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 SLC38A5Q8WUX1 472 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 LHX3Q9UBR4 397 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 LIPGQ9Y5X9 500 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 MTCH2Q9Y6C9 303 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 FITM1A5D6W6 292 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 SLC16A5O15375 505 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 ZNF749O43361 778 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 TGM5O43548 720 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 PLPP2O43688 288 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 CNIH1O95406 144 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 PRNPP04156 253 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 OPRD1P41143 372 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 ECI1P42126 302 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 EMP2P54851 167 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 GUCA2AQ02747 115 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 MPV17LQ2QL34 196 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 C1orf194Q5T5A4 169 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 TRNP1Q6NT89 227 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 OR4C15Q8NGM1 316 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 TMEM239Q8WW34 195 aa9.44□□□□□ -0.9
PRDM1-201ENST00000369089 SERTM2A0A1B0GWG4 89 aa9.43□□□□□ -0.9
PRDM1-201ENST00000369089 SLC5A10A0PJK1 596 aa9.43□□□□□ -0.9
PRDM1-201ENST00000369089 HIDE1A8MVS5 230 aa9.43□□□□□ -0.9
PRDM1-201ENST00000369089 ZBTB42B2RXF5 422 aa9.43□□□□□ -0.9
PRDM1-201ENST00000369089 PRAMEF11O60813 436 aa9.43□□□□□ -0.9
PRDM1-201ENST00000369089 GSTP1P09211 210 aaKnown RBP9.43□□□□□ -0.9
PRDM1-201ENST00000369089 WASP42768 502 aa9.43□□□□□ -0.9
PRDM1-201ENST00000369089 PXNP49023 591 aaPredicted RBP9.43□□□□□ -0.9
PRDM1-201ENST00000369089 FXYD4P59646 89 aa9.43□□□□□ -0.9
PRDM1-201ENST00000369089 LSM11P83369 360 aaKnown RBP eCLIP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms